RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 SSPNQ14714 243 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 SLMAPQ14BN4 828 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 C18orf21Q32NC0 220 aaPredicted RBP17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 LCTLQ6UWM7 567 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 CYS1Q717R9 158 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 VN1R4Q7Z5H5 301 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 PPP1R32Q7Z5V6 425 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 MNS1Q8NEH6 495 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 OR56A3Q8NH54 315 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 ATL1Q8WXF7 558 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 TSNARE1Q96NA8 513 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 GPR22Q99680 433 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 EGFL8Q99944 293 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 POPDC3Q9HBV1 291 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 MRPS2Q9Y399 296 aaKnown RBP17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 FER1L5A0AVI2 2057 aa17.3■□□□□ 0.36
PTPRN2-204ENST00000404321 A0A0A6YYC8 382 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 NCF1BA6NI72 391 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 NCF1CA8MVU1 366 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 I3L1I5 382 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 PEX12O00623 359 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 ONECUT2O95948 504 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 CD63P08962 238 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 NCF1P14598 390 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 STMN1P16949 149 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 HRH2P25021 359 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 RELAQ04206 551 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 CATSPEREQ5SY80 951 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 PRMT9Q6P2P2 845 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 ASB18Q6ZVZ8 466 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 FRA10AC1Q70Z53 315 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 KIF18AQ8NI77 898 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 MMABQ96EY8 250 aaPredicted RBP17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 TSPAN17Q96FV3 270 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 SPSB2Q99619 263 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 HAUS8Q9BT25 410 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 SLC25A23Q9BV35 468 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 P4HTMQ9NXG6 502 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 NOVA2Q9UNW9 492 aaKnown RBP17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 PCSK5Q92824 1860 aa17.29■□□□□ 0.36
PTPRN2-204ENST00000404321 KIF2AO00139 706 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 SUV39H1O43463 412 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 LCMT2O60294 686 aaKnown RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ALOX12BO75342 701 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ALBP02768 609 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 CCDC166P0CW27 439 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 SPRP35270 261 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 RPS15AP62244 130 aaKnown RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 SYT16Q17RD7 645 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 VWA2Q5GFL6 755 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 GRTP1Q5TC63 336 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 TCTN3Q6NUS6 607 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 MED25Q71SY5 747 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 CMC1Q7Z7K0 106 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ARHGEF39Q8N4T4 335 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 TMEM102Q8N9M5 508 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 STT3BQ8TCJ2 826 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 NEIL2Q969S2 332 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 MESP1Q9BRJ9 268 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 SLC26A1Q9H2B4 701 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 WDR54Q9H977 334 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 NINJ2Q9NZG7 142 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 TRPC4Q9UBN4 977 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 OARD1Q9Y530 152 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 TXNDC9O14530 226 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 WISP3O95389 354 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 TUBB4AP04350 444 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ANXA5P08758 320 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 GRK3P35626 688 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 CCR8P51685 355 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 PGDP52209 483 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 EMP3P54852 163 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 RRADP55042 308 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 RAB10P61026 200 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 MAT1AQ00266 395 aaKnown RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 OCA2Q04671 838 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 CSHL1Q14406 222 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ATG14Q6ZNE5 492 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 RAPH1Q70E73 1250 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 PRSS41Q7RTY9 318 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ADAMTSL2Q86TH1 951 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 THOC6Q86W42 341 aaKnown RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ZNF740Q8NDX6 193 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 FDCSPQ8NFU4 85 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 OR9A4Q8NGU2 314 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ZCCHC10Q8TBK6 192 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 SLC5A11Q8WWX8 675 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ANKRD7Q92527 254 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 MIEF2Q96C03 454 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 CRB3Q9BUF7 120 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 DERL2Q9GZP9 239 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 DRC3Q9H069 523 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 ZNF282Q9UDV7 671 aaPredicted RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 MTRF1LQ9UGC7 380 aaKnown RBP17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 FBXL4Q9UKA2 621 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 CDC14AQ9UNH5 594 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 SLC22A14Q9Y267 594 aa17.28■□□□□ 0.36
PTPRN2-204ENST00000404321 KCNE1BA0A087WTH5 132 aa17.27■□□□□ 0.35
PTPRN2-204ENST00000404321 VSTM2BA6NLU5 285 aa17.27■□□□□ 0.35
PTPRN2-204ENST00000404321 J3QKU1 62 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms