RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 H2AFJQ9BTM1 129 aa17.14■□□□□ 0.33
THUMPD2-202ENST00000403537 PPCSQ9HAB8 311 aa17.14■□□□□ 0.33
THUMPD2-202ENST00000403537 SLC6A20Q9NP91 592 aa17.14■□□□□ 0.33
THUMPD2-202ENST00000403537 LGALS13Q9UHV8 139 aa17.14■□□□□ 0.33
THUMPD2-202ENST00000403537 SNX7Q9UNH6 387 aa17.14■□□□□ 0.33
THUMPD2-202ENST00000403537 ASB1Q9Y576 335 aa17.14■□□□□ 0.33
THUMPD2-202ENST00000403537 ZNF839A8K0R7 811 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 TARM1B6A8C7 271 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 ZSCAN9O15535 394 aaPredicted RBP17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 HCRTR1O43613 425 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 KERAO60938 352 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 KRT15P19012 456 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 RPA3P35244 121 aaPredicted RBP17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 SF1Q15637 639 aaKnown RBP17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 FAM83EQ2M2I3 478 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 ATP1A1-AS1Q5TC04 95 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 YOD1Q5VVQ6 348 aaPredicted RBP17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 RHBDD2Q6NTF9 364 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 SH2D5Q6ZV89 423 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 CCDC91Q7Z6B0 441 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 DNAJC22Q8N4W6 341 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 OR2L3Q8NG85 312 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 ZUFSPQ96AP4 578 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 ESAMQ96AP7 390 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 RHBDF1Q96CC6 855 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 TMEM79Q9BSE2 394 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 NDC1Q9BTX1 674 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 TRIM54Q9BYV2 358 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 AKIRIN1Q9H9L7 192 aaPredicted RBP17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 FAM60AQ9NP50 221 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 CCDC177Q9NQR7 707 aaPredicted RBP17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 TXLNGQ9NUQ3 528 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 CUEDC1Q9NWM3 386 aaPredicted RBP17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 IRAK4Q9NWZ3 460 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 XPR1Q9UBH6 696 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 PCM1Q15154 2024 aa17.13■□□□□ 0.33
THUMPD2-202ENST00000403537 IGKV1-8A0A0C4DH67 115 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 PABPN1LA6NDY0 278 aaKnown RBP17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 SUPT3HB4E1H0 165 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 TAPBPO15533 448 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 SUV39H1O43463 412 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 SUPT3HO75486 399 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 SBK3P0C264 359 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 MTHFD2P13995 350 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 H2AFXP16104 143 aaPredicted RBP17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 GDF5P43026 501 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 GABRA4P48169 554 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 ARSFP54793 590 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 CDKL1Q00532 357 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 DEFB110Q30KQ9 67 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 PTCHD3Q3KNS1 767 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 KRT71Q3SY84 523 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 LACTB2Q53H82 288 aaPredicted RBP17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 TCTE1Q5JU00 501 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 PRAMEF13Q5VWM6 474 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 FCRL6Q6DN72 434 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 C4orf33Q8N1A6 199 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 ENDOVQ8N8Q3 282 aaKnown RBP17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 OR56A3Q8NH54 315 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 SCYL1Q96KG9 808 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 IP6K3Q96PC2 410 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 OR4K3Q96R72 315 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 TMEM109Q9BVC6 243 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 SGPP1Q9BX95 441 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 C12orf65Q9H3J6 166 aaKnown RBP17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 CD274Q9NZQ7 290 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 TMEM216Q9P0N5 145 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 GPN3Q9UHW5 284 aaPredicted RBP17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 ANAPC2Q9UJX6 822 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 TCFL5Q9UL49 500 aa17.12■□□□□ 0.33
THUMPD2-202ENST00000403537 LRRC14BA6NHZ5 514 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 CTSBP07858 339 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 ANXA5P08758 320 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 GRIA3P42263 894 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 AGTR2P50052 363 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 DCDP81605 110 aaKnown RBP17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 ACAP2Q15057 778 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 NCF4Q15080 339 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 CEP85LQ5SZL2 805 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 THEMIS2Q5TEJ8 643 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 PRAMEF17Q5VTA0 474 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 ICE2Q659A1 982 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 TCTN3Q6NUS6 607 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 FIGLAQ6QHK4 219 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 FAM198BQ6UWH4 519 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 PDPRQ8NCN5 879 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 STAG3L4Q8TBR4 150 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 ABHD17AQ96GS6 310 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 ROPN1BQ9BZX4 212 aaPredicted RBP17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 SYNPO2LQ9H987 977 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 ROPN1Q9HAT0 212 aaPredicted RBP17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 CPSF2Q9P2I0 782 aaKnown RBP17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 G3BP2Q9UN86 482 aaKnown RBP17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 KLK4Q9Y5K2 254 aa17.11■□□□□ 0.33
THUMPD2-202ENST00000403537 H3BMH7 237 aa17.1■□□□□ 0.33
THUMPD2-202ENST00000403537 IGHEP01854 428 aa17.1■□□□□ 0.33
THUMPD2-202ENST00000403537 FURINP09958 794 aa17.1■□□□□ 0.33
THUMPD2-202ENST00000403537 PIM1P11309 404 aaPredicted RBP17.1■□□□□ 0.33
THUMPD2-202ENST00000403537 COL6A2P12110 1019 aa17.1■□□□□ 0.33
THUMPD2-202ENST00000403537 CREB1P16220 341 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms