RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PRICKLE3O43900 615 aaPredicted RBP24.65■■□□□ 1.54
CPNE1-205ENST00000401607 TNFP01375 233 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 IL6P05231 212 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 PIK3CBP42338 1070 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 FZD2Q14332 565 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 CCDC6Q16204 474 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 DLEU7Q6UYE1 221 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 DHDDSQ86SQ9 333 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 PHACTR4Q8IZ21 702 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 HIPK4Q8NE63 616 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 OR4K1Q8NGD4 311 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 GMPR2Q9P2T1 348 aaKnown RBP24.65■■□□□ 1.54
CPNE1-205ENST00000401607 KLF15Q9UIH9 416 aa24.65■■□□□ 1.54
CPNE1-205ENST00000401607 PLXND1Q9Y4D7 1925 aa24.64■■□□□ 1.54
CPNE1-205ENST00000401607 TRIOO75962 3097 aa24.64■■□□□ 1.54
CPNE1-205ENST00000401607 NPPAP01160 153 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 PGRP06401 933 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 F3P13726 295 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 CCR8P51685 355 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 CLNS1AP54105 237 aaKnown RBP24.64■■□□□ 1.53
CPNE1-205ENST00000401607 REEP5Q00765 189 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 FLOT2Q14254 428 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 SPIN4Q56A73 249 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 KIAA2013Q8IYS2 634 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 JPH3Q8WXH2 748 aaPredicted RBP24.64■■□□□ 1.53
CPNE1-205ENST00000401607 TMEM125Q96AQ2 219 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 ASB9Q96DX5 294 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 AIF1LQ9BQI0 150 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 TRIM8Q9BZR9 551 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 PRM3Q9NNZ6 103 aa24.64■■□□□ 1.53
CPNE1-205ENST00000401607 H7BY64 318 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 FKBP6O75344 327 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 TGFB1P01137 390 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 PEBP1P30086 187 aaKnown RBP24.63■■□□□ 1.53
CPNE1-205ENST00000401607 SLC19A1P41440 591 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 PHC1P78364 1004 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 PRDX1Q06830 199 aaKnown RBP24.63■■□□□ 1.53
CPNE1-205ENST00000401607 MTAPQ13126 283 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 SYT12Q8IV01 421 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP24.63■■□□□ 1.534e-6■■■□□ 17.2
CPNE1-205ENST00000401607 UBALD2Q8IYN6 164 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 DEFB119Q8N690 84 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 GPR156Q8NFN8 814 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 DNAJB14Q8TBM8 379 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 GPBAR1Q8TDU6 330 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 TESCQ96BS2 214 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 PRAP1Q96NZ9 151 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 STX18Q9P2W9 335 aaKnown RBP24.63■■□□□ 1.53
CPNE1-205ENST00000401607 INVSQ9Y283 1065 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 NEUROG3Q9Y4Z2 214 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 PCDHB11Q9Y5F2 797 aa24.63■■□□□ 1.53
CPNE1-205ENST00000401607 IGKV1-8A0A0C4DH67 115 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 BCAS2O75934 225 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-205ENST00000401607 LRATO95237 230 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 NDUFS1P28331 727 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 ILF3Q12906 894 aaKnown RBP eCLIP24.62■■□□□ 1.537e-7■■■■■ 35.6
CPNE1-205ENST00000401607 TRIM25Q14258 630 aaKnown RBP24.62■■□□□ 1.53
CPNE1-205ENST00000401607 RBBP5Q15291 538 aaKnown RBP24.62■■□□□ 1.53
CPNE1-205ENST00000401607 ZNF542PQ5EBM4 170 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 AAGABQ6PD74 315 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 ARMCX6Q7L4S7 300 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 GJD3Q8N144 294 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 ANKRD53Q8N9V6 530 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 MAFAQ8NHW3 353 aaPredicted RBP24.62■■□□□ 1.53
CPNE1-205ENST00000401607 SLC26A7Q8TE54 656 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 GTF2H4Q92759 462 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 PCDHAC1Q9H158 963 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 RHBGQ9H310 441 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 OR51B5Q9H339 312 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 S100A14Q9HCY8 104 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 SIRT5Q9NXA8 310 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 FANCMQ8IYD8 2048 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 METTL12A8MUP2 240 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 NDUFS2O75306 463 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 MYO1DO94832 1006 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 CXCR2P25025 360 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 TIA1P31483 386 aaKnown RBP eCLIP24.62■■□□□ 1.531e-6■■■□□ 17.9
CPNE1-205ENST00000401607 PHEXP78562 749 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 PWP1Q13610 501 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 RABL3Q5HYI8 236 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 GALNT18Q6P9A2 607 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 GFM2Q969S9 779 aaKnown RBP24.62■■□□□ 1.53
CPNE1-205ENST00000401607 AASDHPPTQ9NRN7 309 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 NMRK1Q9NWW6 199 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 SPHK1Q9NYA1 384 aa24.62■■□□□ 1.53
CPNE1-205ENST00000401607 TRBV23OR9-2A0A075B6M9 112 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 STK25O00506 426 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 KDM1AO60341 852 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 TBX6O95947 436 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-205ENST00000401607 CSNK1G2P78368 415 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 C6orf10Q5SRN2 563 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 NANOGP8Q6NSW7 305 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 PYDC1Q8WXC3 89 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 CXorf40BQ96DE9 158 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 KLHDC7BQ96G42 594 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 OR52E6Q96RD3 313 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 NT5DC2Q9H857 520 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 NANOGQ9H9S0 305 aa24.61■■□□□ 1.53
CPNE1-205ENST00000401607 FEZF1A0PJY2 475 aa24.6■■□□□ 1.53
CPNE1-205ENST00000401607 SAP18O00422 153 aaKnown RBP24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms