RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 LRIF1Q5T3J3 769 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CRTC1Q6UUV9 634 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CCDC103Q8IW40 242 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 PLPP6Q8IY26 295 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 ZDHHC6Q9H6R6 413 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 TPT1P8Q9HAU6 139 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 TMEM161AQ9NX61 479 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 QPCTLQ9NXS2 382 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 FZD4Q9ULV1 537 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 SNX6Q9UNH7 406 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 RNF6Q9Y252 685 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 PSMD11O00231 422 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 OXSR1O95747 527 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CHRM5P08912 532 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 AMD1P17707 334 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 FPR1P21462 350 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 AOAHP28039 575 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 POU1F1P28069 291 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CRATP43155 626 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 ALDH7A1P49419 539 aaKnown RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 ILF2Q12905 390 aaKnown RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 GAB1Q13480 694 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 RFX4Q33E94 735 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 TTLL9Q3SXZ7 439 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 FRG2Q64ET8 278 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 STEAP3Q658P3 488 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CCSAPQ6IQ19 270 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 CAPN13Q6MZZ7 669 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 NAGSQ8N159 534 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 OR9Q2Q8NGE9 314 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 GTPBP3Q969Y2 492 aaKnown RBP10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 FRG2BQ96QU4 278 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 YIPF2Q9BWQ6 316 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 TM9SF3Q9HD45 589 aa10.23□□□□□ -0.77
PPP4R1-203ENST00000400556 E7EQ34 232 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 ITGAMP11215 1152 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 SERPINB1P30740 379 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 PREPP48147 710 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 CDH12P55289 794 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 SELENBP1Q13228 472 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 ACOX1Q15067 660 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 SYT6Q5T7P8 510 aaPredicted RBP10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 DEFB128Q7Z7B8 93 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 SAMD11Q96NU1 681 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 MAGIXQ9H6Y5 334 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 C14orf119Q9NWQ9 140 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 NDRG4Q9ULP0 352 aaKnown RBP10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 PCDHGA6Q9Y5G7 932 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 GPC6Q9Y625 555 aaPredicted RBP10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 GNG14A0A1W2PPG7 69 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 TMEM88BA6NKF7 163 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 M0R082 166 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 GFRA2O00451 464 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 PRRG1O14668 218 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 TLL1O43897 1013 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 IGHA2P01877 340 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 TIGD6Q17RP2 521 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 DUOXA1Q1HG43 343 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 COX20Q5RI15 118 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 SPOUT1Q5T280 376 aaKnown RBP10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 SLC44A2Q8IWA5 706 aaPredicted RBP10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 FAM217AQ8IXS0 508 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 SLC5A8Q8N695 610 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 C1orf52Q8N6N3 182 aaKnown RBP10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 NIPSNAP1Q9BPW8 284 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 CENPOQ9BU64 300 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 KLF16Q9BXK1 252 aaPredicted RBP10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 TRIM39Q9HCM9 518 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 RNF186Q9NXI6 227 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 OGDHLQ9ULD0 1010 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 ZNF232Q9UNY5 417 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 ETFAP13804 333 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 CD9P21926 228 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 MAGEA2P43356 314 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 WNT3P56703 355 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 SF3B4Q15427 424 aaKnown RBP eCLIP10.22□□□□□ -0.777e-7■■■■■ 28.3
PPP4R1-203ENST00000400556 KLHL17Q6TDP4 642 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 SLC35B4Q969S0 331 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 KCNS3Q9BQ31 491 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 HTATIP2Q9BUP3 242 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 MTG2Q9H4K7 406 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 KCTD5Q9NXV2 234 aa10.22□□□□□ -0.77
PPP4R1-203ENST00000400556 OR2A25A4D2G3 310 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 A8MV72 311 aaPredicted RBP10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 PTHP01270 115 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 CKMP06732 381 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 MC1RQ01726 317 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 MEF2AQ02078 507 aaPredicted RBP10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 ACSM2AQ08AH3 577 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 NAE1Q13564 534 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 IRF5Q13568 498 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 ACSM2BQ68CK6 577 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 CHST9Q7L1S5 443 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 BBS7Q8IWZ6 715 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 CMTM8Q8IZV2 173 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 C2orf73Q8N5S3 287 aaPredicted RBP10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 CAPSLQ8WWF8 208 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 S100ZQ8WXG8 99 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 PLD4Q96BZ4 506 aa10.21□□□□□ -0.77
PPP4R1-203ENST00000400556 VMP1Q96GC9 406 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms