RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 PCDHB14Q9Y5E9 798 aa13.07□□□□□ -0.32
SIRPA-203ENST00000400068 H7BY64 318 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 OR7A17O14581 309 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 ACOT8O14734 319 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 RPN2P04844 631 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 IL12AP29459 219 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 SERPINB10P48595 397 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 HNMTP50135 292 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 NUDT6P53370 316 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 ARSFP54793 590 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 MYBPC1Q00872 1141 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 CATSPEREQ5SY80 951 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.06□□□□□ -0.32
SIRPA-203ENST00000400068 TRIM40Q6P9F5 258 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 ZNF605Q86T29 641 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 ZFP28Q8NHY6 868 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 DOK4Q8TEW6 326 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 PRAP1Q96NZ9 151 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 SEZ6LQ9BYH1 1024 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 ACPTQ9BZG2 426 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 DNMT3BQ9UBC3 853 aaKnown RBP13.06□□□□□ -0.32
SIRPA-203ENST00000400068 DBTP11182 482 aaKnown RBP13.06□□□□□ -0.32
SIRPA-203ENST00000400068 FOSL2P15408 326 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 HOXD12P35452 270 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 SLC6A11P48066 632 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 TRIM16LQ309B1 348 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 INTS11Q5TA45 600 aaKnown RBP13.06□□□□□ -0.32
SIRPA-203ENST00000400068 ZUFSPQ96AP4 578 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 MAELQ96JY0 434 aaKnown RBP13.06□□□□□ -0.32
SIRPA-203ENST00000400068 SNTNA6NMZ2 147 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 TNFRSF11BO00300 401 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 C6orf47O95873 294 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 CA3P07451 260 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 LAMP1P11279 417 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 RFC2P35250 354 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 INPP1P49441 399 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 C21orf59P57076 290 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 RPS26P62854 115 aaKnown RBP13.06□□□□□ -0.32
SIRPA-203ENST00000400068 PTSQ03393 145 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 HTR3DQ70Z44 454 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 MARVELD2Q8N4S9 558 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 STARD8Q92502 1023 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 RAB8BQ92930 207 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 RETREG1Q9H6L5 497 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 TMED5Q9Y3A6 229 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 ANK1P16157 1881 aa13.06□□□□□ -0.32
SIRPA-203ENST00000400068 PRSS51A0A1B0GVH4 220 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 M0QX08 132 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 TMCC2O75069 709 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 DNTTP04053 509 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ZNF8P17098 575 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-203ENST00000400068 CCNA2P20248 432 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 FSHRP23945 695 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 BMPR1AP36894 532 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 SRSF11Q05519 484 aaKnown RBP13.05□□□□□ -0.32
SIRPA-203ENST00000400068 TRAF3Q13114 568 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 STK11Q15831 433 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ANXA8L1Q5VT79 327 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 TICAM1Q8IUC6 712 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 FAM20CQ8IXL6 584 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ADGRG5Q8IZF4 528 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 CPA6Q8N4T0 437 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 OR9Q1Q8NGQ5 310 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 TRMT2BQ96GJ1 504 aaKnown RBP13.05□□□□□ -0.32
SIRPA-203ENST00000400068 KCNC2Q96PR1 638 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 AIF1LQ9BQI0 150 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 TRMT61BQ9BVS5 477 aaKnown RBP13.05□□□□□ -0.32
SIRPA-203ENST00000400068 FZD3Q9NPG1 666 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 DDX28Q9NUL7 540 aaKnown RBP13.05□□□□□ -0.32
SIRPA-203ENST00000400068 USE1Q9NZ43 259 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 OR1A2Q9Y585 309 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 FAM92AA1XBS5 289 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 TMEM202A6NGA9 273 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 H3BNC9 293 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ZNF30P17039 623 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 CCR2P41597 374 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ASMTP46597 345 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 KCNAB2Q13303 367 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 CCSMST1Q4G0I0 132 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 XKR5Q6UX68 686 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 TTC29Q8NA56 475 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ZCCHC10Q8TBK6 192 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ARMC5Q96C12 935 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 CXorf40BQ96DE9 158 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 MYRFLQ96LU7 910 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 SLC35A5Q9BS91 424 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ZMAT5Q9UDW3 170 aaKnown RBP13.05□□□□□ -0.32
SIRPA-203ENST00000400068 A0A1W2PPW3 197 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 MITFO75030 526 aaPredicted RBP13.05□□□□□ -0.32
SIRPA-203ENST00000400068 MATN4O95460 622 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 APODP05090 189 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ST13P50502 369 aaKnown RBP13.05□□□□□ -0.32
SIRPA-203ENST00000400068 UGT2A3Q6UWM9 527 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 OR2A12Q8NGT7 310 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 PKP4Q99569 1192 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 CCDC3Q9BQI4 270 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 MUC13Q9H3R2 512 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 ENTPD4Q9Y227 616 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 LCTP09848 1927 aa13.05□□□□□ -0.32
SIRPA-203ENST00000400068 FAM220BPB1ANY3 271 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms