RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 OASLQ15646 514 aaKnown RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 TMEM31Q5JXX7 168 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 FRG2Q64ET8 278 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 DRICH1Q6PGQ1 229 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 KLHDC10Q6PID8 442 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 C15orf39Q6ZRI6 1047 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 KLHDC9Q8NEP7 349 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 OR10T2Q8NGX3 314 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 FRG2BQ96QU4 278 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 RTKNQ9BST9 563 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 ERVK-6Q9BXR3 956 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 COMMD9Q9P000 198 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 CDC14CA4D256 554 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CAPN5O15484 640 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 NME6O75414 186 aaPredicted RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 EPOP01588 193 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 BPGMP07738 259 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 DNAJB1P25685 340 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CHN2P52757 468 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 DSTNP60981 165 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 SYT16Q17RD7 645 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 PRPF38BQ5VTL8 546 aaKnown RBP7.72□□□□□ -1.17
USP47-203ENST00000399455 ANKRD33Q7Z3H0 272 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 CREG2Q8IUH2 290 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 PROKR2Q8NFJ6 384 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 UCN3Q969E3 161 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 DDIT4LQ96D03 193 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 USP54Q70EL1 1684 aa7.72□□□□□ -1.17
USP47-203ENST00000399455 ZNF487B1APH4 448 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 IFNA6P05013 189 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 MNDAP41218 407 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 HADHBP55084 474 aaKnown RBP7.71□□□□□ -1.17
USP47-203ENST00000399455 OR2B6P58173 313 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 NTHL1P78549 312 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 ZNF267Q14586 743 aaPredicted RBP7.71□□□□□ -1.17
USP47-203ENST00000399455 IFI44LQ53G44 452 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 MZT2BQ6NZ67 158 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 SLC2A13Q96QE2 648 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 SLC35A5Q9BS91 424 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 CLEC4MQ9H2X3 399 aaPredicted RBP7.71□□□□□ -1.17
USP47-203ENST00000399455 POPDC3Q9HBV1 291 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 TIMMDC1Q9NPL8 285 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 MBLAC1A4D2B0 266 aaPredicted RBP7.71□□□□□ -1.17
USP47-203ENST00000399455 A6NL46 340 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 SCELO95171 688 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 ZNF234Q14588 700 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 CA9Q16790 459 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 TMEM35AQ53FP2 167 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 ZNF542PQ5EBM4 170 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 ARHGAP36Q6ZRI8 547 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 HTR3DQ70Z44 454 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 NET1Q7Z628 596 aaPredicted RBP7.71□□□□□ -1.17
USP47-203ENST00000399455 LINC00471Q8N535 108 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 BMFQ96LC9 184 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 LENG8Q96PV6 779 aaPredicted RBP7.71□□□□□ -1.17
USP47-203ENST00000399455 ZDHHC5Q9C0B5 715 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 ACAD8Q9UKU7 415 aa7.71□□□□□ -1.17
USP47-203ENST00000399455 A0A0J9YY10 115 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 BTN3A3O00478 584 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 NBNO60934 754 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 PROCP04070 461 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 CD2P06729 351 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 SLC7A9P82251 487 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 MALLQ13021 153 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 MELKQ14680 651 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 POU5F2Q8N7G0 328 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 C6orf62Q9GZU0 229 aaPredicted RBP7.71□□□□□ -1.18
USP47-203ENST00000399455 CMTM6Q9NX76 183 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 WBP1LQ9NX94 342 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 PRPF19Q9UMS4 504 aaKnown RBP7.71□□□□□ -1.18
USP47-203ENST00000399455 PLLPQ9Y342 182 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 PTRH2Q9Y3E5 179 aaKnown RBP7.71□□□□□ -1.18
USP47-203ENST00000399455 TIMM22Q9Y584 194 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 PCDHGB2Q9Y5G2 931 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 CPNE3O75131 537 aaKnown RBP7.71□□□□□ -1.18
USP47-203ENST00000399455 NIPSNAP2O75323 286 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 MATN1P21941 496 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 IRAK1P51617 712 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 EPHA4P54764 986 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 CD47Q08722 323 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 MZT1Q08AG7 82 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 ZMYND11Q15326 602 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 TIGD2Q4W5G0 525 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 FAM78AQ5JUQ0 283 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 AGTRAPQ6RW13 159 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 SIAH1Q8IUQ4 282 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.71□□□□□ -1.18
USP47-203ENST00000399455 ZNF440Q8IYI8 595 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 ZADH2Q8N4Q0 377 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 MFSD3Q96ES6 412 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 IFT46Q9NQC8 304 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 DIABLOQ9NR28 239 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 ING3Q9NXR8 418 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 KCND3Q9UK17 655 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 MYRFQ9Y2G1 1151 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 AP1M2Q9Y6Q5 423 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 TTC24A2A3L6 582 aaPredicted RBP7.71□□□□□ -1.18
USP47-203ENST00000399455 ADAMTS4O75173 837 aa7.71□□□□□ -1.18
USP47-203ENST00000399455 TUBB3Q13509 450 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms