RNA–Protein interactions for RNA: ENST00000399349.5

ITSN1-208, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,191 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-208ENST00000399349 CREG1O75629 220 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 UBXN7O94888 489 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 OR1E2P47887 323 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 RPS13P62277 151 aaKnown RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 MYLK3Q32MK0 819 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 SLC15A3Q8IY34 581 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 ZNF615Q8N8J6 731 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 PIK3R3Q92569 461 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 TMCO6Q96DC7 493 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 SIPA1Q96FS4 1042 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 HSH2DQ96JZ2 352 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 CCM2Q9BSQ5 444 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 EIF3KQ9UBQ5 218 aaKnown RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 SLIT3O75094 1523 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 LOC100130705A0A1B0GUX0 176 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 XPNPEP2O43895 674 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 PCDHGA12O60330 932 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 SLC3A1Q07837 685 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 TSTQ16762 297 aaKnown RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 CDHR3Q6ZTQ4 885 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 ZNF627Q7L945 461 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 FCGR1BQ92637 280 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 ZSCAN5AQ9BUG6 496 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 TBL1XR1Q9BZK7 514 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 CST11Q9H112 138 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 DUXAA6NLW8 204 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 KLF11O14901 512 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 ZNF12P17014 697 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 OR2B6P58173 313 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 CHAF1BQ13112 559 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 LASP1Q14847 261 aaKnown RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 XKR4Q5GH76 650 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 HSDL2Q6YN16 418 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 SPATC1Q76KD6 591 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 LRRTM4Q86VH4 590 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 AMIGO3Q86WK7 504 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 SAMD14Q8IZD0 417 aaPredicted RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 AQP11Q8NBQ7 271 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 SCAMP4Q969E2 229 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 NSUN5Q96P11 429 aaKnown RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 GDAP2Q9NXN4 497 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 MOCS1Q9NZB8 636 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 ACTR3BQ9P1U1 418 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 RP1L1Q8IWN7 2480 aaPredicted RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 A0A1W2PPW3 197 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 UPK3BL1B0FP48 263 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 UPK3BL2E5RIL1 263 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 ID2Q02363 134 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 NFATC2Q13469 925 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 PTGR1Q14914 329 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 PDCD4Q53EL6 469 aaKnown RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 GPRC6AQ5T6X5 926 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 NCCRP1Q6ZVX7 275 aaPredicted RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 TMPRSS9Q7Z410 1059 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 CCDC115Q96NT0 180 aa12.8□□□□□ -0.36
ITSN1-208ENST00000399349 C11orf84Q9BUA3 381 aaPredicted RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 THUMPD1Q9NXG2 353 aaKnown RBP12.8□□□□□ -0.36
ITSN1-208ENST00000399349 A8MU76 341 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 KHNYNO15037 678 aaKnown RBP12.79□□□□□ -0.36
ITSN1-208ENST00000399349 ADH5P11766 374 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 TYRP14679 529 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 CCND3P30281 292 aaPredicted RBP12.79□□□□□ -0.36
ITSN1-208ENST00000399349 CDKN1CP49918 316 aaPredicted RBP12.79□□□□□ -0.36
ITSN1-208ENST00000399349 DUOXA1Q1HG43 343 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 TMIGD1Q6UXZ0 262 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 TPRG1Q6ZUI0 275 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 NAXEQ8NCW5 288 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 KCTD7Q96MP8 289 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 PRICKLE1Q96MT3 831 aaPredicted RBP12.79□□□□□ -0.36
ITSN1-208ENST00000399349 TDP1Q9NUW8 608 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 B4GALT6Q9UBX8 382 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 DNAJB4Q9UDY4 337 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 SCML2Q9UQR0 700 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 LCHNA4D1U4 455 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 B4GALT2O60909 372 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 RFPL1O75677 317 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 DLDP09622 509 aaKnown RBP12.79□□□□□ -0.36
ITSN1-208ENST00000399349 SLC2A2P11168 524 aaPredicted RBP12.79□□□□□ -0.36
ITSN1-208ENST00000399349 ACSL1P33121 698 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 LSAMPQ13449 338 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 ZBED5Q49AG3 693 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 IFNL1Q8IU54 200 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 GEMIN6Q8WXD5 167 aaKnown RBP12.79□□□□□ -0.36
ITSN1-208ENST00000399349 KIAA1191Q96A73 305 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 GAS2L1Q99501 681 aaPredicted RBP12.79□□□□□ -0.36
ITSN1-208ENST00000399349 MGME1Q9BQP7 344 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 TTYH2Q9BSA4 534 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 PCDHGA10Q9Y5H3 936 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 CPED1A4D0V7 1026 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 BEST1O76090 585 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 C6orf47O95873 294 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 PGAM2P15259 253 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 KCNE1P15382 129 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 SLC6A4P31645 630 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 ENTPD1P49961 510 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 SLC18A1P54219 525 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 SMU1Q2TAY7 513 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 EIPR1Q53HC9 387 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 SPIN4Q56A73 249 aa12.79□□□□□ -0.36
ITSN1-208ENST00000399349 BRAT1Q6PJG6 821 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms