RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SVOPQ8N4V2 548 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 DYNC2LI1Q8TCX1 351 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 ALOXE3Q9BYJ1 711 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 ATG10Q9H0Y0 220 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 CCNB1IP1Q9NPC3 277 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 FBXO8Q9NRD0 319 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 KIAA1522Q9P206 1035 aaPredicted RBP24.75■■□□□ 1.55
COL13A1-203ENST00000398969 TRIM43BA6NCK2 446 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 COX7A2P14406 83 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 CYP2A7P20853 494 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 CTSOP43234 321 aaPredicted RBP24.75■■□□□ 1.55
COL13A1-203ENST00000398969 STK19P49842 368 aaPredicted RBP24.75■■□□□ 1.55
COL13A1-203ENST00000398969 ITGA1P56199 1179 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 WDR5P61964 334 aaKnown RBP24.75■■□□□ 1.55
COL13A1-203ENST00000398969 MVKQ03426 396 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 ATG16L2Q8NAA4 619 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 TRIM43Q96BQ3 446 aaPredicted RBP24.75■■□□□ 1.55
COL13A1-203ENST00000398969 HERC2P3Q9BVR0 1158 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 ASPSCR1Q9BZE9 553 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 PPIL1Q9Y3C6 166 aa24.75■■□□□ 1.55
COL13A1-203ENST00000398969 BNIP3LO60238 219 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 CPSF4O95639 269 aaKnown RBP24.74■■□□□ 1.55
COL13A1-203ENST00000398969 SRCP12931 536 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 KRT20P35900 424 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 PFN3P60673 137 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 PERM1Q5SV97 790 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 FAHD1Q6P587 224 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 OR8J2Q8NGG1 315 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 MCCC1Q96RQ3 725 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-203ENST00000398969 REEP1Q9H902 201 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 FAM120CQ9NX05 1096 aaKnown RBP24.74■■□□□ 1.55
COL13A1-203ENST00000398969 SIRT5Q9NXA8 310 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 THUMPD1Q9NXG2 353 aaKnown RBP24.74■■□□□ 1.55
COL13A1-203ENST00000398969 PCDH10Q9P2E7 1040 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 KRBA1A5PL33 1030 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 SLC16A5O15375 505 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 ADAM23O75077 832 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 C1SP09871 688 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 SERPINB10P48595 397 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 NCS1P62166 190 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 SNRPD1P62314 119 aaKnown RBP24.74■■□□□ 1.55
COL13A1-203ENST00000398969 IFITM3Q01628 133 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 CPA6Q8N4T0 437 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 MAGEB10Q96LZ2 347 aaPredicted RBP24.74■■□□□ 1.55
COL13A1-203ENST00000398969 PITX2Q99697 317 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 SUV39H2Q9H5I1 410 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 IL21Q9HBE4 155 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 SPG21Q9NZD8 308 aa24.74■■□□□ 1.55
COL13A1-203ENST00000398969 LSM7Q9UK45 103 aaKnown RBP24.74■■□□□ 1.55
COL13A1-203ENST00000398969 YY2O15391 372 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 MRPS14O60783 128 aaKnown RBP24.73■■□□□ 1.55
COL13A1-203ENST00000398969 LAG3P18627 525 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 CD22P20273 847 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 AP1S2P56377 157 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 CSTF3Q12996 717 aaKnown RBP24.73■■□□□ 1.55
COL13A1-203ENST00000398969 PLEKHS1Q5SXH7 462 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 TMEM236Q5W0B7 351 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 PDE12Q6L8Q7 609 aaKnown RBP24.73■■□□□ 1.55
COL13A1-203ENST00000398969 SERPINA13PQ6UXR4 307 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 PRSS48Q7RTY5 328 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 ADCK1Q86TW2 530 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 BBS7Q8IWZ6 715 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 OR6Q1Q8NGQ2 317 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 FIBINQ8TAL6 211 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 UBE2FQ969M7 185 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 BTBD2Q9BX70 525 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 BBS2Q9BXC9 721 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 RASSF1Q9NS23 344 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 TMEM247A6NEH6 219 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 BMP4P12644 408 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 EPHB3P54753 998 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 PROX2Q3B8N5 592 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 IQCCQ4KMZ1 466 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 FBXO46Q6PJ61 603 aaPredicted RBP24.73■■□□□ 1.55
COL13A1-203ENST00000398969 DDX53Q86TM3 631 aaKnown RBP24.73■■□□□ 1.55
COL13A1-203ENST00000398969 SNX29P2Q8IUI4 249 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 SYNPOQ8N3V7 929 aa24.73■■□□□ 1.55
COL13A1-203ENST00000398969 WBP4O75554 376 aaKnown RBP24.72■■□□□ 1.55
COL13A1-203ENST00000398969 URODP06132 367 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 ATP1B2P14415 290 aaPredicted RBP24.72■■□□□ 1.55
COL13A1-203ENST00000398969 IRF8Q02556 426 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 RAB33AQ14088 237 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 VEZF1Q14119 521 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 PAGE2BQ5JRK9 111 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 CDC26Q8NHZ8 85 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 PHF10Q8WUB8 498 aaKnown RBP24.72■■□□□ 1.55
COL13A1-203ENST00000398969 AUTS2Q8WXX7 1259 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 ARMC5Q96C12 935 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 VPS29Q9UBQ0 182 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 CD84Q9UIB8 345 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 PCDHB11Q9Y5F2 797 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 INSL5Q9Y5Q6 135 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 KIAA0100Q14667 2235 aaKnown RBP24.72■■□□□ 1.55
COL13A1-203ENST00000398969 C9P02748 559 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 ACRP10323 421 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 LAMP1P11279 417 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 GRK3P35626 688 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 RPP38P78345 283 aaKnown RBP24.72■■□□□ 1.55
COL13A1-203ENST00000398969 CREMQ03060 361 aa24.72■■□□□ 1.55
COL13A1-203ENST00000398969 NPRL3Q12980 569 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms