RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 CCNFP41002 786 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 MLLT3P42568 568 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 RNF144AP50876 292 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 AQP4P55087 323 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 AP1S2P56377 157 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 TXNL4AP83876 142 aaKnown RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 NNATQ16517 81 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 CAND1Q86VP6 1230 aaKnown RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 GLB1L3Q8NCI6 653 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 TMEM203Q969S6 136 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 RGMAQ96B86 450 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 NUSAP1Q9BXS6 441 aaKnown RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 KCNN2Q9H2S1 579 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 SEC61A2Q9H9S3 476 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 HRASLS2Q9NWW9 162 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 ING3Q9NXR8 418 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 CKLFQ9UBR5 152 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 BTN3A3O00478 584 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 TPD52L2O43399 206 aaKnown RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 PRAMEF11O60813 436 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 CNMDO75829 334 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 KLF8O95600 359 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 ITGB1P05556 798 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 GLDCP23378 1020 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 RPS13P62277 151 aaKnown RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 SCRN3Q0VDG4 424 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 TGFBIQ15582 683 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 TTLL10Q6ZVT0 673 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 NUP54Q7Z3B4 507 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 CDH24Q86UP0 819 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 THAP3Q8WTV1 239 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 IL17FQ96PD4 163 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 SSU72Q9NP77 194 aaKnown RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 IFT80Q9P2H3 777 aaPredicted RBP11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 UTS2RQ9UKP6 389 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 DLGAP4Q9Y2H0 992 aa11.22□□□□□ -0.61
PCDHGA8-201ENST00000398604 A0A0U1RQS6 177 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 FAM234BA2RU67 622 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 ELOA3DA6NLF2 546 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 WWP2O00308 870 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 PITPNM1O00562 1244 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 PRODHO43272 600 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 STC1P52823 247 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 OLR1P78380 273 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 CD47Q08722 323 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 LMAN2Q12907 356 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 PAFAH1B3Q15102 231 aaKnown RBP11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 ELOA3BQ3SY89 546 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 CRTC2Q53ET0 693 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 ELOA3Q8NG57 546 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 CRYGNQ8WXF5 182 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 AURKBQ96GD4 344 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 CGREF1Q99674 301 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 NDC1Q9BTX1 674 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 CALML5Q9NZT1 146 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 RIMKLBQ9ULI2 386 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 C9J4A7 227 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 E7ENX8 843 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 LATO43561 262 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 KDELR3O43731 214 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 TRAPPC6AO75865 159 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 ALPPP05187 535 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 FAM163BP0C2L3 166 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 KCNJ5P48544 419 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 PXNP49023 591 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 CCR3P51677 355 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 LPAL2Q16609 132 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 ARHGAP40Q5TG30 622 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 ARHGAP22Q7Z5H3 698 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 MEIOBQ8N635 442 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 DGCR14Q96DF8 476 aaKnown RBP11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 LRRC3Q9BY71 257 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 TPSD1Q9BZJ3 242 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 ELAC1Q9H777 363 aaKnown RBP11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 CXorf21Q9HAI6 301 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 ZNF282Q9UDV7 671 aaPredicted RBP11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 DMTF1Q9Y222 760 aa11.21□□□□□ -0.61
PCDHGA8-201ENST00000398604 RBM47A0AV96 593 aaKnown RBP11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 FAM159BA6NKW6 160 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 CBLP22681 906 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 FMO3P31513 532 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 WNT7BP56706 349 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 SCARB2Q14108 478 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 SIX1Q15475 284 aaPredicted RBP11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 CST9Q5W186 159 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 FRMD7Q6ZUT3 714 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 SPATC1Q76KD6 591 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 CILP2Q8IUL8 1156 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 WDR60Q8WVS4 1066 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 AP3S1Q92572 193 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 LRRC58Q96CX6 371 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 FZD3Q9NPG1 666 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 SPHK2Q9NRA0 654 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 OAZ3Q9UMX2 235 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 HEBP2Q9Y5Z4 205 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 SLC30A4O14863 429 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 KLK3P07288 261 aaPredicted RBP11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 PRKACGP22612 351 aa11.21□□□□□ -0.62
PCDHGA8-201ENST00000398604 DIO3P55073 304 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms