RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 SLC26A7Q8TE54 656 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 TM9SF4Q92544 642 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 DYRK2Q92630 601 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 BCL2L2Q92843 193 aaPredicted RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 ZNF524Q96C55 264 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 PGM2Q96G03 612 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 C4orf45Q96LM5 186 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 AK8Q96MA6 479 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 UHRF2Q96PU4 802 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 NDNQ99608 321 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 PSD2Q9BQI7 771 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 URM1Q9BTM9 101 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 CDK19Q9BWU1 502 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 SNX25Q9H3E2 840 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 SRD5A3Q9H8P0 318 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 UPF2Q9HAU5 1272 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 ZNF334Q9HCZ1 680 aaPredicted RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 SIX2Q9NPC8 291 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 GPR173Q9NS66 373 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 IARS2Q9NSE4 1012 aaKnown RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 FAM207AQ9NSI2 230 aaPredicted RBP2.46□□□□□ -2.02
CD47-203ENST00000398258 P4HTMQ9NXG6 502 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 PKD2L2Q9NZM6 624 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 FBXL5Q9UKA1 691 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 PCDHGA1Q9Y5H4 931 aa2.46□□□□□ -2.02
CD47-203ENST00000398258 KIAA1210Q9ULL0 1709 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 PRR23AA6NEV1 266 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 SMIM1B2RUZ4 78 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 PRSS46E5RG02 174 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 KLF11O14901 512 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 KHDRBS3O75525 346 aaKnown RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 EDN1P05305 212 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 SP1P08047 785 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 FAM157CP0CG43 387 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 F3P13726 295 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 VCLP18206 1134 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 CCND3P30281 292 aaPredicted RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 DUTP33316 252 aaKnown RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 LINC01547P58512 204 aaPredicted RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 GCNT1Q02742 428 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 IL10RBQ08334 325 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 SRSF9Q13242 221 aaKnown RBP eCLIP2.45□□□□□ -2.02
CD47-203ENST00000398258 NONOQ15233 471 aaKnown RBP eCLIP2.45□□□□□ -2.02
CD47-203ENST00000398258 C2orf76Q3KRA6 126 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 KIAA1644Q3SXP7 199 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 G2E3Q7L622 706 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 CCDC91Q7Z6B0 441 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 ANKRD46Q86W74 232 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 RCOR2Q8IZ40 523 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 KIRREL3Q8IZU9 778 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 ZNF843Q8N446 348 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 CARNMT1Q8N4J0 409 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 DNAJC22Q8N4W6 341 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 STPG4Q8N801 248 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 NAT8LQ8N9F0 302 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 CTCFLQ8NI51 663 aaPredicted RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 CKAP2Q8WWK9 683 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 PIK3R3Q92569 461 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 TSACCQ96A04 125 aaPredicted RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 EXOC4Q96A65 974 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 PYCR2Q96C36 320 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 BSCL2Q96G97 398 aaPredicted RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 NSL1Q96IY1 281 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 TSSK2Q96PF2 358 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 KLHL5Q96PQ7 755 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 RASL10BQ96S79 203 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 CDCA3Q99618 268 aaPredicted RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 HNRNPABQ99729 332 aaKnown RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 CCDC3Q9BQI4 270 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 CACNG6Q9BXT2 260 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 LSG1Q9H089 658 aaKnown RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 THAP2Q9H0W7 228 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 MMADHCQ9H3L0 296 aaPredicted RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 C10orf88Q9H8K7 445 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 RAVER2Q9HCJ3 691 aaKnown RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 MRPL17Q9NRX2 175 aaKnown RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 PHPT1Q9NRX4 125 aaPredicted RBP2.45□□□□□ -2.02
CD47-203ENST00000398258 CHKBQ9Y259 395 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 RIPK3Q9Y572 518 aa2.45□□□□□ -2.02
CD47-203ENST00000398258 PFASO15067 1338 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 TRAV18A0A075B6X5 111 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 BLOC1S5-TXNDC5H3BN57 136 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 SCO2O43819 266 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 PCDH7O60245 1069 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 KINO60870 393 aaKnown RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 DDHD2O94830 711 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 AP2A2O94973 939 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 EML2O95834 649 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 YES1P07947 543 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 C8orf89P0DMQ9 161 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 ALDH4A1P30038 563 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 HNF4AP41235 474 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 NPBWR1P48145 328 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 KIAA1024LP59773 190 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 FOLH1Q04609 750 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 RBM39Q14498 530 aaKnown RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 LASP1Q14847 261 aaKnown RBP2.44□□□□□ -2.02
CD47-203ENST00000398258 RPS6KA1Q15418 735 aa2.44□□□□□ -2.02
CD47-203ENST00000398258 TEAD2Q15562 447 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms