RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 C17orf64Q86WR6 236 aa24.37■■□□□ 1.49
U2AF1-203ENST00000398137 KLHDC8AQ8IYD2 350 aa24.37■■□□□ 1.49
U2AF1-203ENST00000398137 TMEM151AQ8N4L1 468 aa24.37■■□□□ 1.49
U2AF1-203ENST00000398137 PTGR2Q8N8N7 351 aaPredicted RBP24.37■■□□□ 1.49
U2AF1-203ENST00000398137 TCTN2Q96GX1 697 aa24.37■■□□□ 1.49
U2AF1-203ENST00000398137 SMC6Q96SB8 1091 aa24.37■■□□□ 1.49
U2AF1-203ENST00000398137 ARHGAP9Q9BRR9 750 aa24.37■■□□□ 1.49
U2AF1-203ENST00000398137 ULBP3Q9BZM4 244 aa24.37■■□□□ 1.49
U2AF1-203ENST00000398137 C12orf65Q9H3J6 166 aaKnown RBP24.37■■□□□ 1.49
U2AF1-203ENST00000398137 FAM60AQ9NP50 221 aa24.37■■□□□ 1.49
U2AF1-203ENST00000398137 MKS1Q9NXB0 559 aa24.37■■□□□ 1.49
U2AF1-203ENST00000398137 MRPS18BQ9Y676 258 aaKnown RBP24.37■■□□□ 1.49
U2AF1-203ENST00000398137 ZNF891A8MT65 544 aaPredicted RBP24.36■■□□□ 1.49
U2AF1-203ENST00000398137 MAP3K7O43318 606 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 KLK8O60259 260 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 CCNT2O60583 730 aaKnown RBP24.36■■□□□ 1.49
U2AF1-203ENST00000398137 SPAG7O75391 227 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 STK16O75716 305 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 CDH1P12830 882 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 CCT5P48643 541 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 ALDH18A1P54886 795 aaKnown RBP24.36■■□□□ 1.49
U2AF1-203ENST00000398137 NFATC3Q12968 1075 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 GPR19Q15760 415 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 DEFB110Q30KQ9 67 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 TMTC4Q5T4D3 741 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 HDXQ7Z353 690 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 ADCK2Q7Z695 626 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 BANPQ8N9N5 519 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 GALNT6Q8NCL4 622 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 PGM2Q96G03 612 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 DYRK1BQ9Y463 629 aa24.36■■□□□ 1.49
U2AF1-203ENST00000398137 LRRC14BA6NHZ5 514 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 TARM1B6A8C7 271 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 KIAA0754O94854 1291 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 CREB1P16220 341 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 NFKB2Q00653 900 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 TUBB3Q13509 450 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 NAA25Q14CX7 972 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 ATP1A1-AS1Q5TC04 95 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 LRRC70Q7Z2Q7 622 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 ESX1Q8N693 406 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 SNX31Q8N9S9 440 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 NEIL2Q969S2 332 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 PHF21BQ96EK2 531 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 PLCD4Q9BRC7 762 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 CD244Q9BZW8 370 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 DNAJC11Q9NVH1 559 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 SENP1Q9P0U3 644 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 GRID1Q9ULK0 1009 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 TMCO1Q9UM00 188 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 KLK4Q9Y5K2 254 aa24.35■■□□□ 1.49
U2AF1-203ENST00000398137 TLN1Q9Y490 2541 aaKnown RBP24.35■■□□□ 1.49
U2AF1-203ENST00000398137 TENM4Q6N022 2769 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 OR2A25A4D2G3 310 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 GOLGA6L10A6NI86 522 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 A8MT66 165 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 PYCARD-AS1I3L0S3 204 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 PROCP04070 461 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 CDC20Q12834 499 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 CDC16Q13042 620 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 ZNF425Q6IV72 752 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 BORAQ6PGQ7 559 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 PAQR7Q86WK9 346 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 SLC5A11Q8WWX8 675 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 STARD8Q92502 1023 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 ZUFSPQ96AP4 578 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 IQCGQ9H095 443 aaKnown RBP24.34■■□□□ 1.49
U2AF1-203ENST00000398137 FGF21Q9NSA1 209 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 GEMIN8Q9NWZ8 242 aaKnown RBP24.34■■□□□ 1.49
U2AF1-203ENST00000398137 ANKMY1Q9P2S6 941 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 OPTCQ9UBM4 332 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 SNX7Q9UNH6 387 aa24.34■■□□□ 1.49
U2AF1-203ENST00000398137 H7BY64 318 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 J3QKU1 62 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 HCRTR1O43613 425 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 PLIN3O60664 434 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 CTSVO60911 334 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 SIX3O95343 332 aaPredicted RBP24.33■■□□□ 1.49
U2AF1-203ENST00000398137 PRKAR1AP10644 381 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 TAC1P20366 129 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 ACY1Q03154 408 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 PDK4Q16654 411 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 LARP7Q4G0J3 582 aaKnown RBP eCLIP24.33■■□□□ 1.49
U2AF1-203ENST00000398137 TNFAIP8L3Q5GJ75 292 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 C6orf15Q6UXA7 325 aaPredicted RBP24.33■■□□□ 1.49
U2AF1-203ENST00000398137 DNAJC22Q8N4W6 341 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 KIAA1143Q96AT1 154 aaPredicted RBP24.33■■□□□ 1.49
U2AF1-203ENST00000398137 PRAP1Q96NZ9 151 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 CHRNA10Q9GZZ6 450 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 CROTQ9UKG9 612 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 KCNE2Q9Y6J6 123 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 PCM1Q15154 2024 aa24.33■■□□□ 1.49
U2AF1-203ENST00000398137 TMEM150CB9EJG8 249 aa24.32■■□□□ 1.48
U2AF1-203ENST00000398137 AGPSO00116 658 aa24.32■■□□□ 1.48
U2AF1-203ENST00000398137 HAT1O14929 419 aa24.32■■□□□ 1.48
U2AF1-203ENST00000398137 EEF1DP29692 281 aaKnown RBP24.32■■□□□ 1.48
U2AF1-203ENST00000398137 GABRA4P48169 554 aa24.32■■□□□ 1.48
U2AF1-203ENST00000398137 POLE2P56282 527 aa24.32■■□□□ 1.48
U2AF1-203ENST00000398137 CCDC153Q494R4 210 aa24.32■■□□□ 1.48
U2AF1-203ENST00000398137 CATSPEREQ5SY80 951 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms