RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 FAM171A1Q5VUB5 890 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 MBOAT1Q6ZNC8 495 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 CEP68Q76N32 757 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 CHPFQ8IZ52 775 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 SETD6Q8TBK2 473 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 TMCO6Q96DC7 493 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 PYURFQ96I23 114 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 CCDC59Q9P031 241 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 OR2A25A4D2G3 310 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 OR5K3A6NET4 321 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 LOC730098B7Z3J9 87 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 SLC28A1O00337 649 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 CTDSP2O14595 271 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 DIRAS1O95057 198 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 EOMESO95936 686 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 ALPIP09923 528 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 MSL3P1P0C860 447 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 ITGAMP11215 1152 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 ENPP1P22413 925 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 SLC15A1P46059 708 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 CDH4P55283 916 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 MAD2L1Q13257 205 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 SMN1Q16637 294 aaKnown RBP15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 C5orf22Q49AR2 442 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 SPANXN2Q5MJ10 180 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 FAM205BPQ63HN1 556 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 RNF180Q86T96 592 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 ZDHHC21Q8IVQ6 265 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 CACTIN-AS1Q8N1I8 211 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 GLB1L3Q8NCI6 653 aaPredicted RBP15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 SNAPC3Q92966 411 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 MARVELD3Q96A59 401 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 ULK4Q96C45 1275 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 EID2BQ96D98 161 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 CDADC1Q9BWV3 514 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 GPR63Q9BZJ6 419 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 MAGIXQ9H6Y5 334 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 ABCG2Q9UNQ0 655 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 PCDHB9Q9Y5E1 797 aa15.5■□□□□ 0.07
CHMP1A-201ENST00000397901 FAM220BPB1ANY3 271 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 NOS1APO75052 506 aaPredicted RBP15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 ZNF780AO75290 641 aaPredicted RBP15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 PGLSO95336 258 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 BCKDHAP12694 445 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 CACNG1Q06432 222 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 CPZQ66K79 652 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 GALNT10Q86SR1 603 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 STK40Q8N2I9 435 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 PDLIM5Q96HC4 596 aaKnown RBP15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 HHIPL1Q96JK4 782 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 CPPED1Q9BRF8 314 aaPredicted RBP15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 ITPAQ9BY32 194 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 FAM126AQ9BYI3 521 aaPredicted RBP15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 AASDHPPTQ9NRN7 309 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 PRSS21Q9Y6M0 314 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 TRBV5-3A0A0A0MS03 114 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 MANBAO00462 879 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 DSCR3O14972 297 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 RECQL5O94762 991 aaPredicted RBP15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 GLUD1P00367 558 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 C1QCP02747 245 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 CDKN2CP42773 168 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 RPS5P46782 204 aaKnown RBP15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 FAM189BP81408 668 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 DUSP4Q13115 394 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 PUS10Q3MIT2 529 aaKnown RBP15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 ATG9BQ674R7 924 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 SLC24A5Q71RS6 500 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 NRARPQ7Z6K4 114 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 SERPINA9Q86WD7 417 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 ZNF540Q8NDQ6 660 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 ABCG8Q9H221 673 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 DLGAP4Q9Y2H0 992 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 HSPE1-MOB4S4R3N1 261 aa15.49■□□□□ 0.07
CHMP1A-201ENST00000397901 CHD5Q8TDI0 1954 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 MTMR11A4FU01 709 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 H3BQ06 376 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 TMEM189-UBE2V1I3L0A0 370 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 PER2O15055 1255 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 ARHGEF9O43307 516 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 UGT2B17O75795 530 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 LRATO95237 230 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 SLC25A14O95258 325 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 GJB5O95377 273 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 GSTM1P09488 218 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 IL32P24001 234 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 DAPP51397 102 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 UGT2B15P54855 530 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 SP3Q02447 781 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 CPSF6Q16630 551 aaKnown RBP eCLIP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 USP39Q53GS9 565 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 RNF219Q5W0B1 726 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 SHQ1Q6PI26 577 aaKnown RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 RSPO2Q6UXX9 243 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 CALHM3Q86XJ0 350 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 FBXL6Q8N531 539 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 TP53I13Q8NBR0 393 aaPredicted RBP15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 OR52E4Q8NGH9 312 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 SLC7A6Q92536 515 aa15.48■□□□□ 0.07
CHMP1A-201ENST00000397901 TSSK3Q96PN8 268 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms