RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 GRIN2CQ14957 1233 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 LRRC26Q2I0M4 334 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 BROXQ5VW32 411 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 GALNT5Q7Z7M9 940 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TMEM159Q96B96 161 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TMEFF2Q9UIK5 374 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 LOC100130705A0A1B0GUX0 176 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 J3QRK9 145 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CPNE6O95741 557 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SLC16A8O95907 504 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CD247P20963 164 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 XPAP23025 273 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PDHA2P29803 388 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TTKP33981 857 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MTAPQ13126 283 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 GTF2H3Q13889 308 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DUOXA1Q1HG43 343 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 LIPJQ5W064 366 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 XAF1Q6GPH4 301 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TRAM1L1Q8N609 369 aa17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 STOX2Q9P2F5 926 aaPredicted RBP17.74■□□□□ 0.43
CHRFAM7A-202ENST00000397827 KIAA0100Q14667 2235 aaKnown RBP17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 AQP9O43315 295 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SCN2BO60939 215 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 LAMP1P11279 417 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 GSSP48637 474 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RPS3AP61247 264 aaKnown RBP17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 KCNJ8Q15842 424 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF284Q2VY69 593 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 C6orf141Q5SZD1 244 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 C1orf53Q5VUE5 145 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 VASH1Q7L8A9 365 aaPredicted RBP17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZBTB46Q86UZ6 589 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DCP2Q8IU60 420 aaKnown RBP17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 LMNTD1Q8N9Z9 388 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 BPIFB6Q8NFQ5 453 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF420Q8TAQ5 688 aaPredicted RBP17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 BTN2A2Q8WVV5 523 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 NOTCH4Q99466 2003 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DOK1Q99704 481 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 EHD1Q9H4M9 534 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 C3orf18Q9UK00 162 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PTPRSQ13332 1948 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MAGEB17A8MXT2 336 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 NPIPB8E9PQR5 432 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 hCG_2039718K7EN88 272 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 KDM1AO60341 852 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PSIP1O75475 530 aaKnown RBP17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CCNDBP1O95273 360 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TIMP1P01033 207 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SYN1P17600 705 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TCEA1P23193 301 aaKnown RBP17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 IL1RL1Q01638 556 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 LAIR2Q6ISS4 152 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 NEK10Q6ZWH5 1172 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 VTCN1Q7Z7D3 282 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 OR13F1Q8NGS4 319 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZSCAN5AQ9BUG6 496 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SGK2Q9HBY8 427 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SACM1LQ9NTJ5 587 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 IL36AQ9UHA7 158 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 FBXO10Q9UK96 956 aa17.73■□□□□ 0.43
CHRFAM7A-202ENST00000397827 AP2A2O94973 939 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 KCNK5O95279 499 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 NNMTP40261 264 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 DCDC1P59894 354 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ACSM2AQ08AH3 577 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CPZQ66K79 652 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ACSM2BQ68CK6 577 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CEP68Q76N32 757 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RASGRP3Q8IV61 690 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ING5Q8WYH8 240 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SNX19Q92543 992 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CLP1Q92989 425 aaKnown RBP17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SH3KBP1Q96B97 665 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 WRAP53Q9BUR4 548 aaKnown RBP17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 LHPPQ9H008 270 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SIAEQ9HAT2 523 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 MYO1GB0I1T2 1018 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ABCB7O75027 752 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 EPN2O95208 641 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 HTR1AP08908 422 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 METAP1P53582 386 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 TMEM115Q12893 351 aaPredicted RBP17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 EPS8Q12929 822 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ACOX1Q15067 660 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 RBM48Q5RL73 367 aaKnown RBP17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 ZNF697Q5TEC3 545 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SERPINA11Q86U17 422 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PEX5LQ8IYB4 626 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SPARTQ8N0X7 666 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 HDAC2Q92769 488 aaKnown RBP17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 GLYATL1Q969I3 302 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 AP2M1Q96CW1 435 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 FCRL1Q96LA6 429 aa17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SPATA6Q9NWH7 488 aaPredicted RBP17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 SAMD4AQ9UPU9 718 aaKnown RBP17.72■□□□□ 0.43
CHRFAM7A-202ENST00000397827 PTGES3LE9PB15 166 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 CYP4B1P13584 511 aa17.71■□□□□ 0.43
CHRFAM7A-202ENST00000397827 IMPA1P29218 277 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms