RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 TMEM198Q66K66 360 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 SYCE2Q6PIF2 218 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 LRRC56Q8IYG6 542 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 RYBPQ8N488 228 aaPredicted RBP5.67□□□□□ -1.5
PTPRD-206ENST00000397617 PPP1R14BQ96C90 147 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 LRCH3Q96II8 777 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 TAS2R9Q9NYW1 312 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 NCKAP1Q9Y2A7 1128 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 MYRFQ9Y2G1 1151 aa5.67□□□□□ -1.5
PTPRD-206ENST00000397617 OR51F1A6NGY5 319 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ARPC2O15144 300 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PROM1O43490 865 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 OLR1P78380 273 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 SEMG2Q02383 582 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CPTPQ5TA50 214 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ANKRD54Q6NXT1 300 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 NUP54Q7Z3B4 507 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 GPR155Q7Z3F1 870 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CIR1Q86X95 450 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 RASGEF1AQ8N9B8 481 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF480Q8WV37 535 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 TFGQ92734 400 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 MVB12AQ96EY5 273 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 DACH2Q96NX9 599 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CYP4F12Q9HCS2 524 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 HEPACAM2A8MVW5 462 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 OR7A17O14581 309 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 C1orf105O95561 183 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 C6P13671 934 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 SDC1P18827 310 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 GPR1P46091 355 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 DIO3P55073 304 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PRKCQQ04759 706 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 OLIG2Q13516 323 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 DUOXA1Q1HG43 343 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 FAM174BQ3ZCQ3 159 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 FAM78AQ5JUQ0 283 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 GARNL3Q5VVW2 1013 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 DHRSXQ8N5I4 330 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 C9orf43Q8TAL5 461 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 RMND5BQ96G75 393 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 LRFN5Q96NI6 719 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 NPLQ9BXD5 320 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 C12orf65Q9H3J6 166 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF395Q9H8N7 513 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 SLC17A6Q9P2U8 582 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PHF11Q9UIL8 331 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 TBC1D3BA6NDS4 549 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 HIDE1A8MVS5 230 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 NEMP1O14524 444 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 TNFSF14O43557 240 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 SOD1P00441 154 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 SKIV2LQ15477 1246 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CST6Q15828 149 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 USP39Q53GS9 565 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 EIF3MQ7L2H7 374 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PIM3Q86V86 326 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 GPR152Q8TDT2 470 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF578Q96N58 590 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ACPTQ9BZG2 426 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 SEMA4BQ9NPR2 832 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PIH1D1Q9NWS0 290 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CDK2AP1O14519 115 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ZSCAN9O15535 394 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 NDUFS2O75306 463 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CTHP32929 405 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 DAG1Q14118 895 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ACOX1Q15067 660 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 RNLSQ5VYX0 342 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ZNF655Q8N720 491 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 OR5P2Q8WZ92 322 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 BADQ92934 168 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 TM9SF3Q9HD45 589 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CMTM6Q9NX76 183 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 GSAPA4D1B5 854 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PCDH17O14917 1159 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 FMO6PO60774 539 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 IGF2P01344 180 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 PIRTP0C851 137 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 HSPA7P48741 367 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CCR8P51685 355 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ROR2Q01974 943 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 HTR4Q13639 388 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 SLC25A30Q5SVS4 291 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ANO7Q6IWH7 933 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 KRT80Q6KB66 452 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 CD300LDQ6UXZ3 194 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 LINGO4Q6UY18 593 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 RINLQ6ZS11 566 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 TSPYL5Q86VY4 417 aaPredicted RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 OR52N2Q8NGI0 321 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 OR2L8Q8NGY9 312 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 GDPD5Q8WTR4 605 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 FBLIM1Q8WUP2 373 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 NEURL3Q96EH8 262 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 FAM120BQ96EK7 910 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 ADI1Q9BV57 179 aa5.66□□□□□ -1.5
PTPRD-206ENST00000397617 LYARQ9NX58 379 aaKnown RBP5.66□□□□□ -1.5
PTPRD-206ENST00000397617 KLQ9UEF7 1012 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms