RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 E2F2Q14209 437 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 KLHL35Q6PF15 583 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 NCSTNQ92542 709 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 AHCYL2Q96HN2 611 aaKnown RBP20.35■□□□□ 0.85
CPNE1-204ENST00000397443 LRRC37BQ96QE4 947 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 UCK1Q9HA47 277 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 PFDN4Q9NQP4 134 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 EVA1BQ9NVM1 165 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 RIC8BQ9NVN3 520 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 BTBD3Q9Y2F9 522 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 ENTPD2Q9Y5L3 495 aa20.35■□□□□ 0.85
CPNE1-204ENST00000397443 ERICH4A6NGS2 130 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 MAGEB17A8MXT2 336 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 FCHO1O14526 889 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 PRAMEF10O60809 474 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 DCTN3O75935 186 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 CAPZBP47756 277 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 REEP5Q00765 189 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 CYP4F3Q08477 520 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 SPEM2Q0P670 501 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 UBAP2LQ14157 1087 aaKnown RBP20.34■□□□□ 0.85
CPNE1-204ENST00000397443 ATP6AP1LQ52LC2 224 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 GUSBP11Q6P575 273 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 FAM92BQ6ZTR7 304 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 LARP4Q71RC2 724 aaKnown RBP eCLIP20.34■□□□□ 0.858e-24■□□□□ 9.5
CPNE1-204ENST00000397443 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.34■□□□□ 0.854e-6■■■□□ 17.2
CPNE1-204ENST00000397443 ACTRT2Q8TDY3 377 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 CCDC74AQ96AQ1 378 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 REPS1Q96D71 796 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 ERP27Q96DN0 273 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 C1orf50Q9BV19 199 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 KLHL3Q9UH77 587 aa20.34■□□□□ 0.85
CPNE1-204ENST00000397443 ZW10O43264 779 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 RGS14O43566 566 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 LCMT2O60294 686 aaKnown RBP20.33■□□□□ 0.85
CPNE1-204ENST00000397443 SERPIND1P05546 499 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 GRK3P35626 688 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 RPS13P62277 151 aaKnown RBP20.33■□□□□ 0.85
CPNE1-204ENST00000397443 NR0B2Q15466 257 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 FITM2Q8N6M3 262 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 ANKRD53Q8N9V6 530 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 OR4K1Q8NGD4 311 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 FCRL4Q96PJ5 515 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 CCDC28BQ9BUN5 200 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 ABCG4Q9H172 646 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 MYLK2Q9H1R3 596 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 TMEM184CQ9NVA4 438 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 SLC12A4Q9UP95 1085 aa20.33■□□□□ 0.85
CPNE1-204ENST00000397443 EP300Q09472 2414 aaPredicted RBP20.33■□□□□ 0.85
CPNE1-204ENST00000397443 SLC28A1O00337 649 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 PCDHGA12O60330 932 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 TGFB1P01137 390 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 CXCR2P25025 360 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 GFERP55789 205 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 USP53Q70EK8 1073 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 LAS2Q8IYD9 372 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 FNDC5Q8NAU1 212 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 UBE2E3Q969T4 207 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 TGM7Q96PF1 710 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 CCT7Q99832 543 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 ZFP69BQ9UJL9 534 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 POMT2Q9UKY4 750 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 SNX7Q9UNH6 387 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 CCL27Q9Y4X3 112 aa20.33■□□□□ 0.84
CPNE1-204ENST00000397443 LY6G6EA0A0G2JKS1 128 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 ANKDD1BA6NHY2 528 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 SAP18O00422 153 aaKnown RBP20.32■□□□□ 0.84
CPNE1-204ENST00000397443 EBAG9O00559 213 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 LSM1O15116 133 aaKnown RBP20.32■□□□□ 0.84
CPNE1-204ENST00000397443 UBDO15205 165 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 CAPN5O15484 640 aaPredicted RBP20.32■□□□□ 0.84
CPNE1-204ENST00000397443 ETHE1O95571 254 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 CDH3P22223 829 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 BCL6P41182 706 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 AP5B1Q2VPB7 878 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 FIGLAQ6QHK4 219 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 TRPM8Q7Z2W7 1104 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 TRIM46Q7Z4K8 759 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 CHCHD4Q8N4Q1 142 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 RXFP3Q9NSD7 469 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 TRIM33Q9UPN9 1127 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 U3KQA8 63 aa20.32■□□□□ 0.84
CPNE1-204ENST00000397443 MDC1Q14676 2089 aaKnown RBP20.32■□□□□ 0.84
CPNE1-204ENST00000397443 OTOGLQ3ZCN5 2332 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 IGHV1OR21-1A0A087WYE8 117 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 A0A0J9YY10 115 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 B4GAT1O43505 415 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 KIF1CO43896 1103 aaKnown RBP20.31■□□□□ 0.84
CPNE1-204ENST00000397443 SEC22BO75396 215 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 LBPP18428 481 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 RPL38P63173 70 aaKnown RBP20.31■□□□□ 0.84
CPNE1-204ENST00000397443 COL9A2Q14055 689 aaPredicted RBP20.31■□□□□ 0.84
CPNE1-204ENST00000397443 SLC5A12Q1EHB4 618 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 C6orf136Q5SQH8 315 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 PERM1Q5SV97 790 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 VN1R5Q7Z5H4 357 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 MACROD1Q9BQ69 325 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 TWSG1Q9GZX9 223 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 VPS4BO75351 444 aa20.31■□□□□ 0.84
CPNE1-204ENST00000397443 SERPINA6P08185 405 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms