RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 WBP11Q9Y2W2 641 aaKnown RBP18.29■□□□□ 0.52
TSPAN4-204ENST00000397404 TP53BP1Q12888 1972 aaPredicted RBP18.29■□□□□ 0.52
TSPAN4-204ENST00000397404 KNL1Q8NG31 2342 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 TNFRSF10AO00220 468 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 PSMD12O00232 456 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 PEX11AO75192 247 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 CLEC3AO75596 197 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 VARSP26640 1264 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 CCT8P50990 548 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 CSNK1G2P78368 415 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 STX5Q13190 355 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 SRSF5Q13243 272 aaKnown RBP18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 TCHHL1Q5QJ38 904 aaPredicted RBP18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 ZNF425Q6IV72 752 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 OR2T11Q8NH01 316 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 FCRL1Q96LA6 429 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 CATSPER2Q96P56 530 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 CD180Q99467 661 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 SLC38A3Q99624 504 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 SLC25A23Q9BV35 468 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 DMRT3Q9NQL9 472 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 HRASLS2Q9NWW9 162 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 ACTR10Q9NZ32 417 aa18.28■□□□□ 0.52
TSPAN4-204ENST00000397404 OR6C74A6NCV1 312 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 BBIP1A8MTZ0 92 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 PRMT3O60678 531 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 SEC22BO75396 215 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 UBXN7O94888 489 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 EPN2O95208 641 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 PCNAP12004 261 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 GLB1P16278 677 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 TSFMP43897 325 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 GPLD1P80108 840 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 NR1D2Q14995 579 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 COQ5Q5HYK3 327 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 GALNT18Q6P9A2 607 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 SPESP1Q6UW49 350 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 ZNF438Q7Z4V0 828 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 FAM181AQ8N9Y4 354 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 SRFBP1Q8NEF9 429 aaKnown RBP18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 QRFPRQ96P65 431 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 EPHA6Q9UF33 1036 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 GPR45Q9Y5Y3 372 aa18.27■□□□□ 0.52
TSPAN4-204ENST00000397404 TRBV23OR9-2A0A075B6M9 112 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 A0A0J9YY10 115 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 RHPN2P1A8MT19 583 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 H7BY64 318 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 BTN3A3O00478 584 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ARHGAP33O14559 1287 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ALDOCP09972 364 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ZNF883P0CG24 379 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 JAK1P23458 1154 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 PIK3R1P27986 724 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 PEBP1P30086 187 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 CAPZBP47756 277 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 SCTRP47872 440 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 CLNS1AP54105 237 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ACSM2AQ08AH3 577 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 CYLC2Q14093 348 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 UBAP2LQ14157 1087 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 TCEA2Q15560 299 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 TMEM35AQ53FP2 167 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 MANEAQ5SRI9 462 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ACSM2BQ68CK6 577 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 PAGE2Q7Z2X7 111 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 C2orf73Q8N5S3 287 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 PATE1Q8WXA2 126 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 PRAP1Q96NZ9 151 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 OR2A14Q96R47 310 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 DPH7Q9BTV6 452 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 CHRNA10Q9GZZ6 450 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 FARSBQ9NSD9 589 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ARMCX1Q9P291 453 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 PTGDR2Q9Y5Y4 395 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 KMT2EQ8IZD2 1858 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 GSAPA4D1B5 854 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 OR2A25A4D2G3 310 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 PCDHGA12O60330 932 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 CFIP05156 583 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 UGT2B7P16662 529 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 AMD1P17707 334 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 DDX5P17844 614 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ASMTP46597 345 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 BNC1Q01954 994 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 KIAA0040Q15053 153 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 RBBP5Q15291 538 aaKnown RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 DPY19L1Q2PZI1 675 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 DEFB133Q30KQ1 61 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 HLA-BQ31612 363 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 INAVAQ3KP66 663 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 SGO1Q5FBB7 561 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 TMEM198Q66K66 360 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 PRR23BQ6ZRT6 265 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ADCK2Q7Z695 626 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 SLC25A45Q8N413 288 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 ZNF655Q8N720 491 aaPredicted RBP18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 OR4C6Q8NH72 309 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 SAP25Q8TEE9 199 aa18.26■□□□□ 0.51
TSPAN4-204ENST00000397404 MTERF1Q99551 399 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms