RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 SPCS2Q15005 226 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 LIPJQ5W064 366 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 ZCCHC8Q6NZY4 707 aaKnown RBP15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 CEP68Q76N32 757 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 UBE2Q1Q7Z7E8 422 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 CADM3Q8N126 398 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 OR8J2Q8NGG1 315 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 FAR1Q8WVX9 515 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 AUTS2Q8WXX7 1259 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 BRD9Q9H8M2 597 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 SIAEQ9HAT2 523 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 ATAD3AQ9NVI7 634 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 B4GALT6Q9UBX8 382 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 B3GNT3Q9Y2A9 372 aa15.48■□□□□ 0.07
CCHCR1-202ENST00000396263 NDUFS2O75306 463 aa15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 EPN2O95208 641 aa15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 ENGP17813 658 aa15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 S100A1P23297 94 aa15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 DNAJA1P31689 397 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 EMX1Q04741 257 aaPredicted RBP15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 CTF1Q16619 201 aa15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 SYT12Q8IV01 421 aa15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 CPA6Q8N4T0 437 aa15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 PANX1Q96RD7 426 aa15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 BARD1Q99728 777 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 ZDHHC6Q9H6R6 413 aa15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 FAM120CQ9NX05 1096 aaKnown RBP15.47■□□□□ 0.07
CCHCR1-202ENST00000396263 A0A1W2PQ67 120 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 XPNPEP2O43895 674 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 BNIP3LO60238 219 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 KDM1AO60341 852 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 POP4O95707 220 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 FPR1P21462 350 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 HLA-FP30511 346 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 KCNC3Q14003 757 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 SERPINA13PQ6UXR4 307 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 DPY19L3Q6ZPD9 716 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 GALNT5Q7Z7M9 940 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 OR7A2PQ8NGA2 310 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 HPS1Q92902 700 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 EMILIN2Q9BXX0 1053 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 EBPLQ9BY08 206 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 CEP44Q9C0F1 390 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 DUSP21Q9H596 190 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 IL23AQ9NPF7 189 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 DAPK2Q9UIK4 370 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 A8MU76 341 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 MAGEB17A8MXT2 336 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 GABARAPO95166 117 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 FABP3P05413 133 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 UGT2B4P06133 528 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 ACVR2AP27037 513 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 KDELR2P33947 212 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 CLK3P49761 638 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 SLC35A2P78381 396 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 GTF2H3Q13889 308 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 OXA1LQ15070 435 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 LDLRAP1Q5SW96 308 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 CBLL1Q75N03 491 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 B3GNT8Q7Z7M8 397 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 DDX53Q86TM3 631 aaKnown RBP15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 PTOV1Q86YD1 416 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 TMC8Q8IU68 726 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 CMTM8Q8IZV2 173 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 ABHD11Q8NFV4 315 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 WDR20Q8TBZ3 569 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 RIBC2Q9H4K1 309 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 TRPV5Q9NQA5 729 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 TPRKBQ9Y3C4 175 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 CDH23Q9H251 3354 aa15.46■□□□□ 0.07
CCHCR1-202ENST00000396263 XYLBO75191 536 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 JRKO75564 520 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 C1QCP02747 245 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 CD22P20273 847 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 EIF3MQ7L2H7 374 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 PARP8Q8N3A8 854 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 RNF175Q8N4F7 328 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 METTL2AQ96IZ6 378 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 ALPK1Q96QP1 1244 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 CCDC90BQ9GZT6 254 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 MCOLN1Q9GZU1 580 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 ATG10Q9H0Y0 220 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 SPATA6Q9NWH7 488 aaPredicted RBP15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 VPS29Q9UBQ0 182 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 ERVK-11Q9UQG0 969 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 RUVBL1Q9Y265 456 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 TRAV19A0A0A6YYK7 116 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 KRT87PA6NCN2 255 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 TEX28O15482 410 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 EFCAB14O75071 495 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 IDUAP35475 653 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 GSSP48637 474 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 VLDLRP98155 873 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 IRF8Q02556 426 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 SIM2Q14190 667 aaPredicted RBP15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 SF3B4Q15427 424 aaKnown RBP eCLIP15.45■□□□□ 0.062e-6■■□□□ 13.8
CCHCR1-202ENST00000396263 LINC00299Q6ZSB3 139 aa15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 PIWIL3Q7Z3Z3 882 aaKnown RBP15.45■□□□□ 0.06
CCHCR1-202ENST00000396263 C11orf24Q96F05 449 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms