RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 OR2A1Q8NGT9 310 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 HMGCLL1Q8TB92 370 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 MMABQ96EY8 250 aaPredicted RBP12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 CABS1Q96KC9 395 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 SH3GL2Q99962 352 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 ZFYVE21Q9BQ24 234 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 PNPLA3Q9NST1 481 aa12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 RUVBL1Q9Y265 456 aaKnown RBP12.84□□□□□ -0.35
VCPKMT-201ENST00000395859 A0A1W2PPV9 198 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 H7C0S8 307 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 PROSCO94903 275 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 EIF2S1P05198 315 aaKnown RBP12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 SSR1P43307 286 aaKnown RBP12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 MAT1AQ00266 395 aaKnown RBP12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 PLOD1Q02809 727 aaPredicted RBP12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 KRTAP1-1Q07627 177 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 BRD3Q15059 726 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 DBN1Q16643 649 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 HKDC1Q2TB90 917 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 GARNL3Q5VVW2 1013 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 PRSS57Q6UWY2 283 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 SLC22A15Q8IZD6 547 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 ZNF567Q8N184 647 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 ARMC10Q8N2F6 343 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 ELP5Q8TE02 316 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 METTL21AQ8WXB1 218 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 ELMO1Q92556 727 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 YIPF2Q9BWQ6 316 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 CDCP1Q9H5V8 836 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 CIDEBQ9UHD4 219 aa12.83□□□□□ -0.36
VCPKMT-201ENST00000395859 A0A0A6YYC8 382 aaPredicted RBP12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 I3L1I5 382 aaPredicted RBP12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 APOL1O14791 398 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 ARHGEF9O43307 516 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 CDC40O60508 579 aaKnown RBP eCLIP12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 TPP2P29144 1249 aaPredicted RBP12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 MC4RP32245 332 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 ARHGAP25P42331 645 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 CYB561P49447 251 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 FBXL19-AS1Q494R0 122 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 FILIP1LQ4L180 1135 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 LRRC8BQ6P9F7 803 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 B3GNT6Q6ZMB0 384 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 PCGF5Q86SE9 256 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 PAQR7Q86WK9 346 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 RPS19BP1Q86WX3 136 aaKnown RBP12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 VRK3Q8IV63 474 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 DCUN1D3Q8IWE4 304 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 OR10Q1Q8NGQ4 319 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 ZDHHC11Q9H8X9 412 aa12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 C19orf25Q9UFG5 118 aaPredicted RBP12.82□□□□□ -0.36
VCPKMT-201ENST00000395859 SVEP1Q4LDE5 3571 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 A0A0U1RQJ8 604 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 OR2W5A6NFC9 320 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 SOWAHDA6NJG2 315 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 NRDCO43847 1150 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 PTMAP06454 111 aaKnown RBP12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 HLCSP50747 726 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 ITGA8P53708 1063 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 FAM53BQ14153 422 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 DENND5AQ6IQ26 1287 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 PACS1Q6VY07 963 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 C16orf47Q6ZP98 133 aaPredicted RBP12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 CAPN12Q6ZSI9 719 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 RELL2Q8NC24 303 aaPredicted RBP12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 ARMC2Q8NEN0 867 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 IQCDQ96DY2 449 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 Q96MF0 132 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 OR2A5Q96R48 311 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 MIPEPQ99797 713 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 BDH2Q9BUT1 245 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 DRC3Q9H069 523 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 HSD3B7Q9H2F3 369 aa12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 KLF13Q9Y2Y9 288 aaPredicted RBP12.81□□□□□ -0.36
VCPKMT-201ENST00000395859 IGKV1-8A0A0C4DH67 115 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 OR14I1A6ND48 311 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 TRIM64A6NGJ6 449 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 TRIM64BA6NI03 449 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 ARHGEF33A8MVX0 844 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 NPIPA2E9PIF3 369 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 NPIPA3F8WFD2 350 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 SMAD7O15105 426 aaKnown RBP12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 PEX1O43933 1283 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 GPC4O75487 556 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 PDE9AO76083 593 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 GOSR1O95249 250 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 SERPINC1P01008 464 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 FTH1P02794 183 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 ANXA5P08758 320 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 ERVK-10P10266 1014 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 EPXP11678 715 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 SKILP12757 684 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 TNNT3P45378 269 aaPredicted RBP12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 AGTR2P50052 363 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 MLF1P58340 268 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 USP10Q14694 798 aaKnown RBP12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 MESDQ14696 234 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 PAPD4Q6PIY7 484 aaKnown RBP12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 CSNK1A1LQ8N752 337 aa12.8□□□□□ -0.36
VCPKMT-201ENST00000395859 TMEM158Q8WZ71 300 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms