RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 PRAP1Q96NZ9 151 aa17.12■□□□□ 0.33
CXCL12-204ENST00000395793 DRC3Q9H069 523 aa17.12■□□□□ 0.33
CXCL12-204ENST00000395793 TRMT6Q9UJA5 497 aaKnown RBP17.12■□□□□ 0.33
CXCL12-204ENST00000395793 CDC14AQ9UNH5 594 aa17.12■□□□□ 0.33
CXCL12-204ENST00000395793 PDE10AQ9Y233 779 aa17.12■□□□□ 0.33
CXCL12-204ENST00000395793 UNC79Q9P2D8 2635 aa17.12■□□□□ 0.33
CXCL12-204ENST00000395793 SVILO95425 2214 aa17.12■□□□□ 0.33
CXCL12-204ENST00000395793 ZGRF1Q86YA3 2104 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 IGHV1-45A0A0A0MS14 117 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 A1L4Q6 167 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 ANKUB1A6NFN9 424 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 EIF3FO00303 357 aaPredicted RBP17.11■□□□□ 0.33
CXCL12-204ENST00000395793 IVDP26440 423 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 EMP2P54851 167 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 CDKN2DP55273 166 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 MFAP5Q13361 173 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 PTK6Q13882 451 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 PPP1R7Q15435 360 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 ZXDCQ2QGD7 858 aaPredicted RBP17.11■□□□□ 0.33
CXCL12-204ENST00000395793 THEMIS2Q5TEJ8 643 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 IRAK1BP1Q5VVH5 260 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 PAQR3Q6TCH7 311 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 ISLR2Q6UXK2 745 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 PRSS41Q7RTY9 318 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 CATSPER1Q8NEC5 780 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 DNAJB14Q8TBM8 379 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 RERGQ96A58 199 aaPredicted RBP17.11■□□□□ 0.33
CXCL12-204ENST00000395793 CNDP1Q96KN2 507 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 PWWP2AQ96N64 755 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 EBNA1BP2Q99848 306 aaKnown RBP17.11■□□□□ 0.33
CXCL12-204ENST00000395793 MACROD1Q9BQ69 325 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 WDR83Q9BRX9 315 aaKnown RBP17.11■□□□□ 0.33
CXCL12-204ENST00000395793 YIPF2Q9BWQ6 316 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 TGIF2Q9GZN2 237 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 CCDC177Q9NQR7 707 aaPredicted RBP17.11■□□□□ 0.33
CXCL12-204ENST00000395793 C14orf105Q9NVL8 296 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 ASIC3Q9UHC3 531 aa17.11■□□□□ 0.33
CXCL12-204ENST00000395793 CES2O00748 559 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 PRPF4O43172 522 aaKnown RBP eCLIP17.1■□□□□ 0.33
CXCL12-204ENST00000395793 JRKO75564 520 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 LDLRP01130 860 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 PRR35P0CG20 571 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 SOX11P35716 441 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 TSFMP43897 325 aaKnown RBP17.1■□□□□ 0.33
CXCL12-204ENST00000395793 CSNK1G2P78368 415 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 ZNF169Q14929 603 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-204ENST00000395793 PHKG1Q16816 387 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 NDUFAF7Q7L592 441 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 CNTN4Q8IWV2 1026 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 OR9A4Q8NGU2 314 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 BRIX1Q8TDN6 353 aaKnown RBP17.1■□□□□ 0.33
CXCL12-204ENST00000395793 GRHL3Q8TE85 626 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 VPS50Q96JG6 964 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 EPS8L2Q9H6S3 715 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 MKKSQ9NPJ1 570 aaPredicted RBP17.1■□□□□ 0.33
CXCL12-204ENST00000395793 TMEM184CQ9NVA4 438 aa17.1■□□□□ 0.33
CXCL12-204ENST00000395793 TRMT1Q9NXH9 659 aaKnown RBP17.1■□□□□ 0.33
CXCL12-204ENST00000395793 UTP6Q9NYH9 597 aaKnown RBP17.1■□□□□ 0.33
CXCL12-204ENST00000395793 CROCCQ5TZA2 2017 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 SCN2AQ99250 2005 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 LOC102723996A0A087X1L8 192 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 NSG1A0A0A6YYJ2 146 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 GOLGA6L10A0A0M3HER8 536 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 WIPF3A6NGB9 483 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 TSPAN12O95859 305 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 AHSGP02765 367 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 ANXA5P08758 320 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 FAM53BQ14153 422 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 PCOLCEQ15113 449 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 SPANXN3Q5MJ09 141 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 AGTRAPQ6RW13 159 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 KBTBD2Q8IY47 623 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 SIRT6Q8N6T7 355 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 SLCO2A1Q92959 643 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 LINGO1Q96FE5 620 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 ATG10Q9H0Y0 220 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 PTGFRNQ9P2B2 879 aa17.09■□□□□ 0.33
CXCL12-204ENST00000395793 KCNE1BA0A087WTH5 132 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 FEZF1A0PJY2 475 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 USP27XA6NNY8 438 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 TXNDC9O14530 226 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 CLDN1O95832 211 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 DDAH2O95865 285 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 HEXBP07686 556 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 IL1RNP18510 177 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 BCL6P41182 706 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 NAE1Q13564 534 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 BBS9Q3SYG4 887 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 C4orf17Q53FE4 359 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 HP1BP3Q5SSJ5 553 aaPredicted RBP17.08■□□□□ 0.32
CXCL12-204ENST00000395793 B3GNTL1Q67FW5 361 aaPredicted RBP17.08■□□□□ 0.32
CXCL12-204ENST00000395793 TRMT10BQ6PF06 316 aaKnown RBP17.08■□□□□ 0.32
CXCL12-204ENST00000395793 TMEM205Q6UW68 189 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 MCOLN3Q8TDD5 553 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 CERS2Q96G23 380 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 CCDC138Q96M89 665 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 LMF1Q96S06 567 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 SGPP1Q9BX95 441 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 ZNF700Q9H0M5 742 aa17.08■□□□□ 0.32
CXCL12-204ENST00000395793 TAS2R13Q9NYV9 303 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms