RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 UGT3A1Q6NUS8 523 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 PRMT9Q6P2P2 845 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 AGTRAPQ6RW13 159 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 Q6ZS92 163 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 GALNT7Q86SF2 657 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 PDSS2Q86YH6 399 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 ANKMY2Q8IV38 441 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 ZC3H7AQ8IWR0 971 aaKnown RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 CISD2Q8N5K1 135 aaKnown RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 ZNF740Q8NDX6 193 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 CALML6Q8TD86 181 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 SNRNP40Q96DI7 357 aaKnown RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 TM4SF19Q96DZ7 209 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 MOCOSQ96EN8 888 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 LINGO1Q96FE5 620 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 CFAP36Q96G28 342 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 FER1L6-AS2Q96M78 137 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 TRIM31Q9BZY9 425 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 AICDAQ9GZX7 198 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 ATG10Q9H0Y0 220 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 ATP13A2Q9NQ11 1180 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 ASF1BQ9NVP2 202 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 MOCS1Q9NZB8 636 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 C5AR2Q9P296 337 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 TRMT6Q9UJA5 497 aaKnown RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 CDC23Q9UJX2 597 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 C3orf18Q9UK00 162 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 SNX24Q9Y343 169 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 COMMD10Q9Y6G5 202 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 MYO9AB2RTY4 2548 aa8.41□□□□□ -1.06
ATG4A-205ENST00000394892 SPTAN1Q13813 2472 aaKnown RBP8.41□□□□□ -1.06
ATG4A-205ENST00000394892 KCNE1BA0A087WTH5 132 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 FEZF1A0PJY2 475 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 CXorf49A8MYA2 514 aaPredicted RBP8.4□□□□□ -1.06
ATG4A-205ENST00000394892 IDSB3KWA1 339 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 PEX12O00623 359 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 ZBTB14O43829 449 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 VPS26AO75436 327 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 WISP2O76076 250 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 TTC4O95801 387 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 B3GALT4O96024 378 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 CD63P08962 238 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 EZRP15311 586 aaKnown RBP8.4□□□□□ -1.06
ATG4A-205ENST00000394892 FBLP22087 321 aaKnown RBP8.4□□□□□ -1.06
ATG4A-205ENST00000394892 ITGA3P26006 1051 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 SOX11P35716 441 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 GMPRP36959 345 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 TAS2R39P59534 338 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 ABATP80404 500 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 DR1Q01658 176 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 AIMP2Q13155 320 aaKnown RBP8.4□□□□□ -1.06
ATG4A-205ENST00000394892 FRG1Q14331 258 aaKnown RBP8.4□□□□□ -1.06
ATG4A-205ENST00000394892 ZNF460Q14592 562 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 PPP1R3AQ16821 1122 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 MUM1Q2TAK8 710 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 EIF2S3LQ2VIR3 472 aaKnown RBP8.4□□□□□ -1.06
ATG4A-205ENST00000394892 C18orf21Q32NC0 220 aaPredicted RBP8.4□□□□□ -1.06
ATG4A-205ENST00000394892 PRAMEF13Q5VWM6 474 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 SBSNQ6UWP8 590 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 KIAA0408Q6ZU52 694 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 CEP97Q8IW35 865 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 RAB42Q8N4Z0 105 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 CLEC1AQ8NC01 280 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 KCT2Q8NC54 265 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 CATSPER1Q8NEC5 780 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 OR9A4Q8NGU2 314 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 OR56A3Q8NH54 315 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 ANKRD49Q8WVL7 239 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 NACC2Q96BF6 587 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 MIEF2Q96C03 454 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 PYCR2Q96C36 320 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 CABS1Q96KC9 395 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 KRT12Q99456 494 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 NAPGQ99747 312 aaPredicted RBP8.4□□□□□ -1.06
ATG4A-205ENST00000394892 CRB3Q9BUF7 120 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 TGIF2Q9GZN2 237 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 CCDC68Q9H2F9 335 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 PARVBQ9HBI1 364 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 SEMA3GQ9NS98 782 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 TMEM184CQ9NVA4 438 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 TAS2R13Q9NYV9 303 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 GRHL1Q9NZI5 618 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 TRPC4Q9UBN4 977 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 ZNF282Q9UDV7 671 aaPredicted RBP8.4□□□□□ -1.06
ATG4A-205ENST00000394892 VWA7Q9Y334 891 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 PCDHGA10Q9Y5H3 936 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 SAR1BQ9Y6B6 198 aa8.4□□□□□ -1.06
ATG4A-205ENST00000394892 UTP20O75691 2785 aaKnown RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 LOC102723996A0A087X1L8 192 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 C4orf51C9J302 202 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 CDC7O00311 574 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 SLC16A5O15375 505 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 KLHL41O60662 606 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 BMP10O95393 424 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 CBX6O95503 412 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 C8GP07360 202 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 PIM1P11309 404 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 CDH1P12830 882 aa8.39□□□□□ -1.07
ATG4A-205ENST00000394892 MEF2AQ02078 507 aaPredicted RBP8.39□□□□□ -1.07
ATG4A-205ENST00000394892 EEF1A2Q05639 463 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms