RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 CPTPQ5TA50 214 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 TMPRSS11AQ6ZMR5 421 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.82□□□□□ -0.36
NFKB1-202ENST00000394820 KRT74Q7RTS7 529 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 SPRED1Q7Z699 444 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 B3GNT8Q7Z7M8 397 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 GALNT12Q8IXK2 581 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 LGI4Q8N135 537 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 OR9Q2Q8NGE9 314 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 DPF3Q92784 378 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 CEP295NLQ96MC4 621 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 SRRDQ9UH36 339 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 ENPP5Q9UJA9 477 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 TET1Q8NFU7 2136 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 CACNG3O60359 315 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 CAPNS1P04632 268 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 HOXB8P17481 243 aaPredicted RBP12.82□□□□□ -0.36
NFKB1-202ENST00000394820 CD40LGP29965 261 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 CAMK2GQ13555 558 aaPredicted RBP12.82□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF284Q2VY69 593 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 TBRG1Q3YBR2 411 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 SNAP47Q5SQN1 464 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 RBFAQ8N0V3 343 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 SVOPLQ8N434 492 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 OR10G2Q8NGC3 310 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 TANKQ92844 425 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 SLC22A12Q96S37 553 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 YIPF4Q9BSR8 244 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 TMEM245Q9H330 911 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 GPBP1L1Q9HC44 474 aaPredicted RBP12.82□□□□□ -0.36
NFKB1-202ENST00000394820 MARCH5Q9NX47 278 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 MS4A12Q9NXJ0 267 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 TVP23BQ9NYZ1 205 aa12.82□□□□□ -0.36
NFKB1-202ENST00000394820 CH25HO95992 272 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 C9P02748 559 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 RPLP0P05388 317 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 FCER2P06734 321 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 HTR7P34969 479 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 RPS7P62081 194 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 TRIM71Q2Q1W2 868 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 STEAP3Q658P3 488 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 APIPQ96GX9 242 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 OSBPL10Q9BXB5 764 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 ITPAQ9BY32 194 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 ALOXE3Q9BYJ1 711 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 TBC1D17Q9HA65 648 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 SGK2Q9HBY8 427 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 DYRK4Q9NR20 520 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 SLC6A13Q9NSD5 602 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 SPATA2Q9UM82 520 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 PCP4L1A6NKN8 68 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 TRIM64CA6NLI5 447 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 MANBAO00462 879 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 C1QCP02747 245 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 ALPPL2P10696 532 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 OGNP20774 298 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 HOXD9P28356 352 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 TGM4P49221 684 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 RNF144AP50876 292 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 CDC42P60953 191 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 LSRQ86X29 649 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 RAB43Q86YS6 212 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 ZNF614Q8N883 585 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 TMEM121BQ9BXQ6 578 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 NUSAP1Q9BXS6 441 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 POLR2J2Q9GZM3 115 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 NTN4Q9HB63 628 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 ASPDHA6ND91 283 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 FAM227AF5H4B4 570 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 WWP2O00308 870 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 PAPSS2O95340 614 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 PSKH1P11801 424 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 DDX5P17844 614 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 ADARB1P78563 741 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 KRT33BQ14525 404 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 TAF1AQ15573 450 aaPredicted RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 CLEC12AQ5QGZ9 265 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 SUSD1Q6UWL2 747 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 HACD2Q6Y1H2 254 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 ASB18Q6ZVZ8 466 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 C1orf52Q8N6N3 182 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 CD200R1Q8TD46 325 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 XAGE5Q8WWM1 108 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 RAB8BQ92930 207 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 SCAMP4Q969E2 229 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 TMEM159Q96B96 161 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 MYO19Q96H55 970 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 TPT1P8Q9HAU6 139 aa12.81□□□□□ -0.36
NFKB1-202ENST00000394820 MRM3Q9HC36 420 aaKnown RBP12.81□□□□□ -0.36
NFKB1-202ENST00000394820 KIAA0513O60268 411 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 RPLP2P05387 115 aaKnown RBP12.8□□□□□ -0.36
NFKB1-202ENST00000394820 SDHBP21912 280 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 MAPK1P28482 360 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 KRT20P35900 424 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 VLDLRP98155 873 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 SMU1Q2TAY7 513 aa12.8□□□□□ -0.36
NFKB1-202ENST00000394820 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.8□□□□□ -0.36
NFKB1-202ENST00000394820 CEP78Q5JTW2 689 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms