RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 TMEM53Q6P2H8 277 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 NEK5Q6P3R8 708 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 SERPINA13PQ6UXR4 307 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 DSG4Q86SJ6 1040 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 SLC29A3Q9BZD2 475 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 SLC25A37Q9NYZ2 338 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 RGS17Q9UGC6 210 aaPredicted RBP15.63■□□□□ 0.09
PCDH1-203ENST00000394536 TRPS1Q9UHF7 1281 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 ACSL6Q9UKU0 697 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 PCDH7O60245 1069 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 RETP07949 1114 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 TSPAN19P0C672 248 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 ITGA2P17301 1181 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 VLDLRP98155 873 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 AQP6Q13520 282 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 TSTQ16762 297 aaKnown RBP15.63■□□□□ 0.09
PCDH1-203ENST00000394536 ADPRMQ3LIE5 342 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 GCNT6Q5T4J0 391 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 IER5LQ5T953 404 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 XAGE5Q8WWM1 108 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 C1GALT1C1Q96EU7 318 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 BARD1Q99728 777 aaKnown RBP15.63■□□□□ 0.09
PCDH1-203ENST00000394536 THG1LQ9NWX6 298 aaKnown RBP15.63■□□□□ 0.09
PCDH1-203ENST00000394536 SLCO3A1Q9UIG8 710 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 NEU3Q9UQ49 428 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 DOCK3Q8IZD9 2030 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 A0A0G2JN53 185 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 CENPXA8MT69 81 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 H3BM21 787 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 C8GP07360 202 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 EPHA2P29317 976 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 MAGEA8P43361 318 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 ACVR1Q04771 509 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 TCAIMQ8N3R3 496 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 LMNTD1Q8N9Z9 388 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 NFKBIDQ8NI38 313 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 IPCEF1Q8WWN9 437 aaPredicted RBP15.63■□□□□ 0.09
PCDH1-203ENST00000394536 CMTM7Q96FZ5 175 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 RIMKLBQ9ULI2 386 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 MICAL3Q7RTP6 2002 aa15.63■□□□□ 0.09
PCDH1-203ENST00000394536 ITIH1P19827 911 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 MANFP55145 182 aaKnown RBP15.62■□□□□ 0.09
PCDH1-203ENST00000394536 ISL1P61371 349 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 IL18R1Q13478 541 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 ZNF691Q5VV52 312 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 CPZQ66K79 652 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 RSPO2Q6UXX9 243 aaPredicted RBP15.62■□□□□ 0.09
PCDH1-203ENST00000394536 SLC38A4Q969I6 547 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 RMI1Q9H9A7 625 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 AP2A2O94973 939 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 TSPAN12O95859 305 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 BDKRB1P46663 353 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 OLR1P78380 273 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 PLEKHG7Q6ZR37 379 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 GPR149Q86SP6 731 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 THOC6Q86W42 341 aaKnown RBP15.62■□□□□ 0.09
PCDH1-203ENST00000394536 NPAS4Q8IUM7 802 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 GPR26Q8NDV2 337 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 MYLIPQ8WY64 445 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 SLC35A5Q9BS91 424 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 RAD18Q9NS91 495 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 B4GALT6Q9UBX8 382 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 SAGE2PA6NJ88 616 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 TAPBPO15533 448 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 CKMT1AP12532 417 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 BMP4P12644 408 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 ATF6P18850 670 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 GABARAPL2P60520 117 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 TIAL1Q01085 375 aaKnown RBP eCLIP15.62■□□□□ 0.09
PCDH1-203ENST00000394536 GRSF1Q12849 480 aaKnown RBP eCLIP15.62■□□□□ 0.09
PCDH1-203ENST00000394536 TJAP1Q5JTD0 557 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 SHQ1Q6PI26 577 aaKnown RBP15.62■□□□□ 0.09
PCDH1-203ENST00000394536 RTN4RL1Q86UN2 441 aaPredicted RBP15.62■□□□□ 0.09
PCDH1-203ENST00000394536 TMEM173Q86WV6 379 aaPredicted RBP15.62■□□□□ 0.09
PCDH1-203ENST00000394536 KRT73Q86Y46 540 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 ENKURQ8TC29 256 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 TRIT1Q9H3H1 467 aaKnown RBP15.62■□□□□ 0.09
PCDH1-203ENST00000394536 CDH7Q9ULB5 785 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 ASF1AQ9Y294 204 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 WDR37Q9Y2I8 494 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 NINQ8N4C6 2090 aa15.62■□□□□ 0.09
PCDH1-203ENST00000394536 A0A1W2PRU2 124 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 ETFAP13804 333 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 PPIBP23284 216 aaKnown RBP15.61■□□□□ 0.09
PCDH1-203ENST00000394536 ASMTP46597 345 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 DAPP51397 102 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 MVKQ03426 396 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 TMEM220Q6QAJ8 160 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 AGTRAPQ6RW13 159 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 TPRG1Q6ZUI0 275 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 USP43Q70EL4 1123 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 C19orf18Q8NEA5 215 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 DNAJB8Q8NHS0 232 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 ZNF675Q8TD23 568 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 CAPN10Q9HC96 672 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 SLC6A13Q9NSD5 602 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 ERVK13-1Q9NX77 482 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 MS4A12Q9NXJ0 267 aa15.61■□□□□ 0.09
PCDH1-203ENST00000394536 H2AFY2Q9P0M6 372 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms