RNA–Protein interactions for RNA: ENST00000394084.5

GAPVD1-205, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-205ENST00000394084 CADM3Q8N126 398 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 GPR156Q8NFN8 814 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 PSMA8Q8TAA3 256 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 APH1BQ8WW43 257 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 PROX1Q92786 737 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ZHX1-C8orf76Q96EF9 292 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 MED8Q96G25 268 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 BTBD2Q9BX70 525 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 TESMINQ9Y4I5 508 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 TMEM221A6NGB7 291 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 OR2AG2A6NM03 316 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 E7EQ34 232 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 HOXA2O43364 376 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 SEMG1P04279 462 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 JUPP14923 745 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 C21orf33P30042 268 aaPredicted RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 RRM2P31350 389 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 CXCR4P61073 352 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ACSM2AQ08AH3 577 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 INAVAQ3KP66 663 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 PRSS36Q5K4E3 855 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ACSM2BQ68CK6 577 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ENTHD1Q8IYW4 607 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 TCAIMQ8N3R3 496 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 MYLIPQ8WY64 445 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 TRMT2BQ96GJ1 504 aaKnown RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 SMG9Q9H0W8 520 aaKnown RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 SUV39H2Q9H5I1 410 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 VPS29Q9UBQ0 182 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 B4GALT6Q9UBX8 382 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 HSPE1-MOB4S4R3N1 261 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 EFCAB9A8MZ26 197 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 GFRA2O00451 464 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 NUAK1O60285 661 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 PRPH2P23942 346 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 CLK1P49759 484 aaKnown RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ITGA1P56199 1179 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 MVKQ03426 396 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 SRSF11Q05519 484 aaKnown RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 HKDC1Q2TB90 917 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.48□□□□□ -0.252e-9■■□□□ 12.3
GAPVD1-205ENST00000394084 TMCO2Q7Z6W1 182 aaPredicted RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 P3H2Q8IVL5 708 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 CMTM8Q8IZV2 173 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 OR52J3Q8NH60 311 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 SPPL2AQ8TCT8 520 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 DUSP26Q9BV47 211 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ZBTB20Q9HC78 741 aaPredicted RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ABCB8Q9NUT2 735 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ABT1Q9ULW3 272 aaKnown RBP13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 ERVW-1Q9UQF0 538 aa13.48□□□□□ -0.25
GAPVD1-205ENST00000394084 TTC34A8MYJ7 566 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 ETHE1O95571 254 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 HOXB6P17509 224 aaKnown RBP13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 TGFBR2P37173 567 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 LIPAP38571 399 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 HNMTP50135 292 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 NUDT6P53370 316 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 CRYBA2P53672 197 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 SNRPD1P62314 119 aaKnown RBP13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 ERICH5Q6P6B1 374 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 PRSS48Q7RTY5 328 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 SLC22A16Q86VW1 577 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 HPS1Q92902 700 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 VOPP1Q96AW1 172 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 TBC1D20Q96BZ9 403 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 DACH2Q96NX9 599 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 HHIPQ96QV1 700 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 TMEM184CQ9NVA4 438 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 RAPGEFL1Q9UHV5 662 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 LSM7Q9UK45 103 aaKnown RBP13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 SH3BP1Q9Y3L3 701 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 LAMA3Q16787 3333 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 OR2A25A4D2G3 310 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 TRIM43BA6NCK2 446 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 TMEM202A6NGA9 273 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 KDM1AO60341 852 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 C9P02748 559 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 ATP1B2P14415 290 aaPredicted RBP13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 ACPPP15309 386 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 CA8P35219 290 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 DOC2AQ14183 400 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 CCSMST1Q4G0I0 132 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 CYP27C1Q4G0S4 372 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 NCCRP1Q6ZVX7 275 aaPredicted RBP13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 CRIPAKQ8N1N5 446 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 C1orf52Q8N6N3 182 aaKnown RBP13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 SLC43A3Q8NBI5 491 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 MCFD2Q8NI22 146 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 COPS4Q9BT78 406 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 SLIRPQ9GZT3 109 aaKnown RBP13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 DCSTAMPQ9H295 470 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 BRD9Q9H8M2 597 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 CCNB1IP1Q9NPC3 277 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 ABCB10Q9NRK6 738 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 RNF6Q9Y252 685 aa13.47□□□□□ -0.25
GAPVD1-205ENST00000394084 SUV39H1O43463 412 aa13.46□□□□□ -0.25
GAPVD1-205ENST00000394084 MYCP01106 439 aaPredicted RBP13.46□□□□□ -0.25
GAPVD1-205ENST00000394084 TGM1P22735 817 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms