RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 GPR34Q9UPC5 381 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 TRIOBPQ9H2D6 2365 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 GNG14A0A1W2PPG7 69 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 DYTNA2CJ06 578 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 GSTA4O15217 222 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 KLF8O95600 359 aaPredicted RBP13.78□□□□□ -0.2
RNF41-202ENST00000394013 NUDT7P0C024 238 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 SMIM18P0DKX4 95 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 HNF4AP41235 474 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 CHN2P52757 468 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 IRX1P78414 480 aaPredicted RBP13.78□□□□□ -0.2
RNF41-202ENST00000394013 RAB30Q15771 203 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 MED27Q6P2C8 311 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 ZNF621Q6ZSS3 439 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 MARVELD2Q8N4S9 558 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 FRMD1Q8N878 549 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 SLC5A11Q8WWX8 675 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 FCRL1Q96LA6 429 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 HHIPQ96QV1 700 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 YIPF3Q9GZM5 350 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 WDR26Q9H7D7 661 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 DGKBQ9Y6T7 804 aa13.78□□□□□ -0.2
RNF41-202ENST00000394013 FPGTO14772 594 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 HNRNPRO43390 633 aaKnown RBP13.77□□□□□ -0.21
RNF41-202ENST00000394013 PRKD3O94806 890 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 TBX6O95947 436 aaPredicted RBP13.77□□□□□ -0.21
RNF41-202ENST00000394013 NPPAP01160 153 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 ANXA6P08133 673 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 C1GALT1C1LP0DN25 315 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 IGFALSP35858 605 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 CSTF3Q12996 717 aaKnown RBP13.77□□□□□ -0.21
RNF41-202ENST00000394013 MLF2Q15773 248 aaPredicted RBP13.77□□□□□ -0.21
RNF41-202ENST00000394013 TPRG1LQ5T0D9 272 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 OTUD3Q5T2D3 398 aaPredicted RBP13.77□□□□□ -0.21
RNF41-202ENST00000394013 ZNF852Q6ZMS4 543 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 TMEM126BQ8IUX1 230 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 RAB7BQ96AH8 199 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 CIDECQ96AQ7 238 aaPredicted RBP13.77□□□□□ -0.21
RNF41-202ENST00000394013 PANX1Q96RD7 426 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 MACROD1Q9BQ69 325 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 KCNH6Q9H252 994 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 CCDC177Q9NQR7 707 aaPredicted RBP13.77□□□□□ -0.21
RNF41-202ENST00000394013 TMEM45AQ9NWC5 275 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 RAB26Q9ULW5 256 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 DYRK1BQ9Y463 629 aa13.77□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3DA0A087WVF3 549 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3IA0A087WXS9 549 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3EA0A087X179 549 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3KA0A087X1G2 549 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 C17orf113A0A1B0GUU1 675 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3FA6NER0 549 aaPredicted RBP13.76□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3LB9A6J9 549 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 CXCR6O00574 342 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 UGDHO60701 494 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 OR6B1O95007 311 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3HP0C7X1 549 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 HOXB3P14651 431 aaPredicted RBP13.76□□□□□ -0.21
RNF41-202ENST00000394013 ATP6V1B1P15313 513 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 C5AR1P21730 350 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 CTHP32929 405 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 GAB1Q13480 694 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 PRAMEF14Q5SWL7 426 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 LRIF1Q5T3J3 769 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 PRAMEF13Q5VWM6 474 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3GQ6DHY5 549 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3CQ6IPX1 549 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 NXPE4Q6UWF7 544 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 COMMD6Q7Z4G1 85 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 CHERPQ8IWX8 916 aaKnown RBP13.76□□□□□ -0.21
RNF41-202ENST00000394013 TBC1D3Q8IZP1 549 aaPredicted RBP13.76□□□□□ -0.21
RNF41-202ENST00000394013 LINC01555Q8NAE3 123 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 CHTF18Q8WVB6 975 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 TESCQ96BS2 214 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 FBXL20Q96IG2 436 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 ITCHQ96J02 903 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 INSM2Q96T92 566 aaPredicted RBP13.76□□□□□ -0.21
RNF41-202ENST00000394013 MENTQ9BUN1 341 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 TEX101Q9BY14 249 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 PCDHGA11Q9Y5H2 935 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 COL6A3P12111 3177 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 A0A096LPI6 279 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 A0A0G2JN53 185 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 RNF103-CHMP3A0A140T963 221 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 ELOVL7A1L3X0 281 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 POM121BA6NF01 834 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 GRXCR2A6NFK2 248 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 UPK1AO00322 258 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 PPM1DO15297 605 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 PCDH7O60245 1069 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 NTRK1P04629 796 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 GPIP06744 558 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 EIF2DP41214 584 aaKnown RBP13.76□□□□□ -0.21
RNF41-202ENST00000394013 ADPRHP54922 357 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 CLCA4Q14CN2 919 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 RBBP5Q15291 538 aaKnown RBP13.76□□□□□ -0.21
RNF41-202ENST00000394013 NHSL2Q5HYW2 709 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 METRNLQ641Q3 311 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 KLHDC8AQ8IYD2 350 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 CATSPER1Q8NEC5 780 aa13.76□□□□□ -0.21
RNF41-202ENST00000394013 MAGEE2Q8TD90 523 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms