RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SLC34A2O95436 690 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 PVRP15151 417 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 HRH2P25021 359 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 CXCR2P25025 360 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 RBBP5Q15291 538 aaKnown RBP23.31■■□□□ 1.32
LRFN4-202ENST00000393952 PERM1Q5SV97 790 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 NXNQ6DKJ4 435 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 TMIGD1Q6UXZ0 262 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 RNF165Q6ZSG1 346 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 ACAD11Q709F0 780 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 PAQR7Q86WK9 346 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 HOMEZQ8IX15 550 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 NCSTNQ92542 709 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 UBE2E3Q969T4 207 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 REPS1Q96D71 796 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 AHCYL2Q96HN2 611 aaKnown RBP23.31■■□□□ 1.32
LRFN4-202ENST00000393952 PLCD4Q9BRC7 762 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 EDEM2Q9BV94 578 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 PARD6AQ9NPB6 346 aa23.31■■□□□ 1.32
LRFN4-202ENST00000393952 EME2A4GXA9 379 aaPredicted RBP23.3■■□□□ 1.32
LRFN4-202ENST00000393952 TNFSF14O43557 240 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 RRP9O43818 475 aaKnown RBP23.3■■□□□ 1.32
LRFN4-202ENST00000393952 FKBP9O95302 570 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 GRK6P43250 576 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 LSM12Q3MHD2 195 aaKnown RBP23.3■■□□□ 1.32
LRFN4-202ENST00000393952 AMZ1Q400G9 498 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 FCRL6Q6DN72 434 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 FIGLAQ6QHK4 219 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 DBX2Q6ZNG2 339 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 PRR23CQ6ZRP0 262 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 TRIM46Q7Z4K8 759 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 SPRED1Q7Z699 444 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 ALYREFQ86V81 257 aaKnown RBP23.3■■□□□ 1.32
LRFN4-202ENST00000393952 HUS1BQ8NHY5 278 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 ACTRT2Q8TDY3 377 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 STON2Q8WXE9 905 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 TUBGCP3Q96CW5 907 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 MTERF1Q99551 399 aaKnown RBP23.3■■□□□ 1.32
LRFN4-202ENST00000393952 CCT7Q99832 543 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 CCDC28BQ9BUN5 200 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 AKTIPQ9H8T0 292 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 PFDN4Q9NQP4 134 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 HEY2Q9UBP5 337 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 CCL27Q9Y4X3 112 aa23.3■■□□□ 1.32
LRFN4-202ENST00000393952 TRBC2A0A5B9 178 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 SLC28A1O00337 649 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 CASC3O15234 703 aaKnown RBP23.29■■□□□ 1.32
LRFN4-202ENST00000393952 CAPN5O15484 640 aaPredicted RBP23.29■■□□□ 1.32
LRFN4-202ENST00000393952 HOXB3P14651 431 aaPredicted RBP23.29■■□□□ 1.32
LRFN4-202ENST00000393952 PNLIPP16233 465 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 GFERP55789 205 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 HMGCS1Q01581 520 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 CSRP2Q16527 193 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 Q6ZSR9 355 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.29■■□□□ 1.32
LRFN4-202ENST00000393952 ANKRD53Q8N9V6 530 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 ACPTQ9BZG2 426 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 PITHD1Q9GZP4 211 aaPredicted RBP23.29■■□□□ 1.32
LRFN4-202ENST00000393952 EPB41L1Q9H4G0 881 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 NT5DC2Q9H857 520 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 PRM3Q9NNZ6 103 aa23.29■■□□□ 1.32
LRFN4-202ENST00000393952 ASCC3Q8N3C0 2202 aaKnown RBP23.28■■□□□ 1.32
LRFN4-202ENST00000393952 OR2A25A4D2G3 310 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 E9PBE3 544 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 ZW10O43264 779 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 OR1F1O43749 312 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 DUX1O43812 170 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 LCMT2O60294 686 aaKnown RBP23.28■■□□□ 1.32
LRFN4-202ENST00000393952 KLHL41O60662 606 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 CKMT1AP12532 417 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 CD1CP29017 333 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 GPLD1P80108 840 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 DAB2P98082 770 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 INAVAQ3KP66 663 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 FAM92BQ6ZTR7 304 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 LARP4Q71RC2 724 aaKnown RBP eCLIP23.28■■□□□ 1.32
LRFN4-202ENST00000393952 VN1R5Q7Z5H4 357 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 ANKS4BQ8N8V4 417 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 TGM7Q96PF1 710 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 SEMA6CQ9H3T2 930 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 RIC8BQ9NVN3 520 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 MDC1Q14676 2089 aaKnown RBP23.28■■□□□ 1.32
LRFN4-202ENST00000393952 UNC13CQ8NB66 2214 aa23.28■■□□□ 1.32
LRFN4-202ENST00000393952 MAGEB17A8MXT2 336 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 FLRT2O43155 660 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 KIF1CO43896 1103 aaKnown RBP23.27■■□□□ 1.32
LRFN4-202ENST00000393952 PRAMEF10O60809 474 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 CDH3P22223 829 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 GRK3P35626 688 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 BCL6P41182 706 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 SCTRP47872 440 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 CFHR1Q03591 330 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 ZNF33BQ06732 778 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 IMPG1Q17R60 797 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 CEP70Q8NHQ1 597 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 NAT6Q93015 286 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 ZUFSPQ96AP4 578 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 MAP3K3Q99759 626 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 RAB33BQ9H082 229 aa23.27■■□□□ 1.32
LRFN4-202ENST00000393952 RHBGQ9H310 441 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms