RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 IL17BQ9UHF5 180 aa18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 PTBP2Q9UKA9 531 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 FARSAQ9Y285 508 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 MDC1Q14676 2089 aaKnown RBP18.16■□□□□ 0.5
PDLIM7-204ENST00000393546 KMT2BQ9UMN6 2715 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 KCNE1BA0A087WTH5 132 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 HYKKA2RU49 373 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 ZNF891A8MT65 544 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 UBXN8O00124 270 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 STK16O75716 305 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 SHBGP04278 402 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 TUBBP07437 444 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 RBP1P09455 135 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 WT1P19544 449 aaPredicted RBP18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 F8A1P23610 371 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 HSD17B3P37058 310 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 HSPA7P48741 367 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 DCDP81605 110 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 MC1RQ01726 317 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 TSNAXIP1Q2TAA8 658 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 PLD6Q8N2A8 252 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 CSNK1A1LQ8N752 337 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 OR4K1Q8NGD4 311 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 SNRNP27Q8WVK2 155 aaKnown RBP18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 NEIL2Q969S2 332 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 C17orf62Q9BQA9 187 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 NLNQ9BYT8 704 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 FAM117AQ9C073 453 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 PCDHGA4Q9Y5G9 962 aa18.15■□□□□ 0.5
PDLIM7-204ENST00000393546 FEZF1A0PJY2 475 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 MAP2K7O14733 419 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 TERTO14746 1132 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 DSCR3O14972 297 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 H2AFYO75367 372 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 RFPL1O75677 317 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 RAB40ALP0C0E4 278 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 GNAZP19086 355 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 GCGRP47871 477 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 EMP3P54852 163 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 CDC16Q13042 620 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 PRTGQ2VWP7 1150 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 CATSPEREQ5SY80 951 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 ZNF385CQ66K41 422 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 LCN10Q6JVE6 187 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 NXPE4Q6UWF7 544 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 AENQ8WTP8 325 aaKnown RBP18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 SCYL1Q96KG9 808 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 GBP5Q96PP8 586 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 TMEM79Q9BSE2 394 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 CD244Q9BZW8 370 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 PELI2Q9HAT8 420 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 DNAJC11Q9NVH1 559 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 GPRC5BQ9NZH0 403 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 TBK1Q9UHD2 729 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 LHX6Q9UPM6 363 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 PCDHGA6Q9Y5G7 932 aa18.14■□□□□ 0.49
PDLIM7-204ENST00000393546 A0A1B0GX78 115 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 C9J4A7 227 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 CLGNO14967 610 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 LCMT2O60294 686 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 CCNT2O60583 730 aaKnown RBP18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 CD63P08962 238 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 PIM1P11309 404 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 PTPN4P29074 926 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 MUM1Q2TAK8 710 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 NKAIN1Q4KMZ8 207 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 FBXO48Q5FWF7 155 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 GARNL3Q5VVW2 1013 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 TMPRSS11BQ86T26 416 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 TDRPQ86YL5 185 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 SNX31Q8N9S9 440 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 MFSD9Q8NBP5 474 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 STARD8Q92502 1023 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 CAVIN3Q969G5 261 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 ESAMQ96AP7 390 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 AIF1LQ9BQI0 150 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 ZNF358Q9NW07 568 aa18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 IFT80Q9P2H3 777 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 GPN3Q9UHW5 284 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-204ENST00000393546 TRBC2A0A5B9 178 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 OR1F1O43749 312 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 C1GALT1C1LP0DN25 315 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 MTHFD2P13995 350 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 GFAPP14136 432 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 CXCR2P25025 360 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 BCL6P41182 706 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 MEF2AQ02078 507 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 COL9A2Q14055 689 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 HKDC1Q2TB90 917 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 TECRLQ5HYJ1 363 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 MLIPQ5VWP3 458 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 CAMKVQ8NCB2 501 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 ACMSDQ8TDX5 336 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 SARGQ9BW04 601 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 SYNPO2LQ9H987 977 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 RAB21Q9UL25 225 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 CDC14AQ9UNH5 594 aa18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 RUVBL1Q9Y265 456 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 MRPS18BQ9Y676 258 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-204ENST00000393546 NKX2-8O15522 239 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms