RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PRDM5Q9NQX1 630 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SH3BP4Q9P0V3 963 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 DNMT3BQ9UBC3 853 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 PCDHB14Q9Y5E9 798 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SLC22A7Q9Y694 548 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 PLCH1Q4KWH8 1693 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 PLIN4Q96Q06 1357 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 PDE4DIPQ5VU43 2346 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 FXYD6-FXYD2A0A087WZ82 144 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TRBV23-1A0A0A0MS06 115 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 A0A1W2PQL4 384 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ELOVL7A1L3X0 281 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TSTD3H0UI37 97 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 AZIN1O14977 448 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 GSRP00390 522 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 STAT5AP42229 794 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 VEGFCP49767 419 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 POLR2JP52435 117 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 NR6A1Q15406 480 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CHRNA6Q15825 494 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TREML2Q5T2D2 321 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CES5AQ6NT32 575 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 EFCAB12Q6NXP0 572 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SLC26A9Q7LBE3 791 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ZER1Q7Z7L7 766 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ZDHHC21Q8IVQ6 265 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 PPHLN1Q8NEY8 458 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 OR6J1Q8NGC5 347 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TRAPPC12Q8WVT3 735 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TPD52L3Q96J77 140 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 OR2A14Q96R47 310 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 GMLQ99445 158 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CLSTN3Q9BQT9 956 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SYT17Q9BSW7 474 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TRMOQ9BU70 441 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 FTHL17Q9BXU8 183 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 POLR2J2Q9GZM3 115 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 FXYD6Q9H0Q3 95 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ABCG8Q9H221 673 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ABCG5Q9H222 651 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 BCAS3Q9H6U6 928 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 RBFOX1Q9NWB1 397 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MYEF2Q9P2K5 600 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SCML1Q9UN30 329 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 PPP2R3BQ9Y5P8 575 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 DUOX1Q9NRD9 1551 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 LOC105369274A0A096LPK9 316 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 NEMP2A6NFY4 417 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 PDHXO00330 501 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 FFAR3O14843 346 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 GPR42O15529 346 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 DHX15O43143 795 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 DLX3O60479 287 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 OLFM2O95897 454 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CBX7O95931 251 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ADRB2P07550 413 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SMIM6P0DI80 62 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 NR2C1P13056 603 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 FSHRP23945 695 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ICAM3P32942 547 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 NRIP1P48552 1158 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MAN2A2P49641 1150 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CLK2P49760 499 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 KIAA1024LP59773 190 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ITKQ08881 620 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ILF3Q12906 894 aaKnown RBP eCLIP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 TNK1Q13470 666 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 KRT33BQ14525 404 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 DUOXA2Q1HG44 320 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 CES4AQ5XG92 561 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 KANSL1Q7Z3B3 1105 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ENTHD1Q8IYW4 607 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 OR4N4Q8N0Y3 316 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 SPPL2AQ8TCT8 520 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ATOH1Q92858 354 aaPredicted RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 COPS5Q92905 334 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 ELP4Q96EB1 424 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MRPL45Q9BRJ2 306 aaKnown RBP7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MED10Q9BTT4 135 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 FSD1LQ9BXM9 530 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 BCL2L14Q9BZR8 327 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 MROH8Q9H579 483 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 C3orf14Q9HBI5 128 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 PCOLCE2Q9UKZ9 415 aa7.42□□□□□ -1.22
VTI1A-201ENST00000393077 LRRC14BA6NHZ5 514 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 TPOP07202 933 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SLC6A2P23975 617 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 CYP2F1P24903 491 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 RYKP34925 604 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 EFNA5P52803 228 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 CYP24A1Q07973 514 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 MXD4Q14582 209 aaPredicted RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 GRIN2CQ14957 1233 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 OPCMLQ14982 345 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 KIAA1614Q5VZ46 1190 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 TBPL2Q6SJ96 375 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.41□□□□□ -1.22
VTI1A-201ENST00000393077 SVBPQ8N300 66 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 TMEM132CQ8N3T6 1108 aa7.41□□□□□ -1.22
VTI1A-201ENST00000393077 ATP6V1C2Q8NEY4 427 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms