RNA–Protein interactions for RNA: ENST00000391976.6

HDLBP-204, Transcript of high density lipoprotein binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HDLBP, Length 4,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-204ENST00000391976 HDDC3Q8N4P3 179 aa12.86□□□□□ -0.35
HDLBP-204ENST00000391976 MRPL43Q8N983 215 aaKnown RBP12.86□□□□□ -0.35
HDLBP-204ENST00000391976 POMGNT2Q8NAT1 580 aa12.86□□□□□ -0.35
HDLBP-204ENST00000391976 PHC3Q8NDX5 983 aa12.86□□□□□ -0.35
HDLBP-204ENST00000391976 RBM4BQ9BQ04 359 aaKnown RBP12.86□□□□□ -0.35
HDLBP-204ENST00000391976 RBM4Q9BWF3 364 aaKnown RBP12.86□□□□□ -0.35
HDLBP-204ENST00000391976 TUBB1Q9H4B7 451 aa12.86□□□□□ -0.35
HDLBP-204ENST00000391976 DNAJB9Q9UBS3 223 aa12.86□□□□□ -0.35
HDLBP-204ENST00000391976 SEC14L3Q9UDX4 400 aa12.86□□□□□ -0.35
HDLBP-204ENST00000391976 SBF1O95248 1867 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 GNB5O14775 395 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 TSPAN19P0C672 248 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 ACTR1BP42025 376 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 DPP6P42658 865 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 HK3P52790 923 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 ACTR1AP61163 376 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 CARTPTQ16568 116 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 GTDC1Q4AE62 458 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 OGFOD2Q6N063 350 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 NOXRED1Q6NXP6 359 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 DEFB119Q8N690 84 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 HMGB4Q8WW32 186 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 PMEPA1Q969W9 287 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 C12orf66Q96MD2 445 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 EDDM13A0A1B0GTR0 161 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 PI15O43692 258 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 CXCL10P02778 98 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 ERVK-21P61565 698 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 RPS13P62277 151 aaKnown RBP12.85□□□□□ -0.35
HDLBP-204ENST00000391976 DAG1Q14118 895 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 PPP2R2DQ66LE6 453 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 PDE12Q6L8Q7 609 aaKnown RBP12.85□□□□□ -0.35
HDLBP-204ENST00000391976 ATG14Q6ZNE5 492 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 FUNDC1Q8IVP5 155 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 PELI3Q8N2H9 469 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 TRAM1L1Q8N609 369 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 C11orf65Q8NCR3 313 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 CMTM7Q96FZ5 175 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 SLC29A1Q99808 456 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 FAIM2Q9BWQ8 316 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 HDHD2Q9H0R4 259 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 C8orf4Q9NR00 106 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 ABCB10Q9NRK6 738 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 CLEC4AQ9UMR7 237 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 CPSF4LA6NMK7 179 aaKnown RBP12.85□□□□□ -0.35
HDLBP-204ENST00000391976 KRT75O95678 551 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 IDSP22304 550 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 PRKACGP22612 351 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 CTSKP43235 329 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 MAPK12P53778 367 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 ERICH5Q6P6B1 374 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 TMEM126BQ8IUX1 230 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 OR7A2PQ8NGA2 310 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 GTPBP3Q969Y2 492 aaKnown RBP12.85□□□□□ -0.35
HDLBP-204ENST00000391976 TRMT61BQ9BVS5 477 aaKnown RBP12.85□□□□□ -0.35
HDLBP-204ENST00000391976 TSC22D4Q9Y3Q8 395 aa12.85□□□□□ -0.35
HDLBP-204ENST00000391976 DICER1Q9UPY3 1922 aaKnown RBP12.85□□□□□ -0.35
HDLBP-204ENST00000391976 CREG1O75629 220 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 FABP3P05413 133 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 HSD17B1P14061 328 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 SP140Q13342 867 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 RCAN2Q14206 197 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 DPY19L1Q2PZI1 675 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 GHDCQ8N2G8 530 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 ATP6V1C2Q8NEY4 427 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 LCN9Q8WX39 176 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 ZNF514Q96K75 400 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-204ENST00000391976 H3BNC9 293 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 SOCS2O14508 198 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 AP2A2O94973 939 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 VNN2O95498 520 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 TCF3P15923 654 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 DOC2AQ14183 400 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 GRIN2CQ14957 1233 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 CMPK2Q5EBM0 449 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 FBXO46Q6PJ61 603 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-204ENST00000391976 TMEM125Q96AQ2 219 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 ZBP1Q9H171 429 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 DNMT3BQ9UBC3 853 aaKnown RBP12.84□□□□□ -0.35
HDLBP-204ENST00000391976 KCNK6Q9Y257 313 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 IQCMA0A1B0GVH7 501 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 PAK4O96013 591 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-204ENST00000391976 NPPAP01160 153 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 CEBPBP17676 345 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 CBLBQ13191 982 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 UBXN2BQ14CS0 331 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 ZNF57Q68EA5 555 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-204ENST00000391976 OR2T11Q8NH01 316 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 UBASH3BQ8TF42 649 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 GATA6Q92908 595 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 FNDC11Q9BVV2 318 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 TBX21Q9UL17 535 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 ASB1Q9Y576 335 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 RTTNQ86VV8 2226 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 A0A0G2JMZ2 1700 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 MFN2O95140 757 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 CLCNKAP51800 687 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 NKX3-2P78367 333 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 SBSNQ6UWP8 590 aa12.84□□□□□ -0.35
HDLBP-204ENST00000391976 GALNT13Q8IUC8 556 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms