RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 SEMA4FO95754 770 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 DDX58O95786 925 aaKnown RBP0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 BAG3O95817 575 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 IGHV2-70P01814 119 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 QDPRP09417 244 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 UMPSP11172 480 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 GARSP41250 739 aaKnown RBP0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ARSEP51690 589 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ERVPABLB-1P60509 514 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ABCE1P61221 599 aaKnown RBP0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 SIRPAP78324 504 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 SRSF9Q13242 221 aaKnown RBP eCLIP0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 IRF3Q14653 427 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 PHKG1Q16816 387 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 UPP1Q16831 310 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TMEM44Q2T9K0 475 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 NHLRC3Q5JS37 347 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 FGD3Q5JSP0 725 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 OR4C11Q6IEV9 310 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 C11orf63Q6NUN7 778 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TMCO3Q6UWJ1 677 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TMTC3Q6ZXV5 915 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 NUP54Q7Z3B4 507 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 LRRC49Q8IUZ0 686 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 RNF175Q8N4F7 328 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TAAR6Q96RI8 345 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 RTBDNQ9BSG5 229 aaPredicted RBP0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ITPAQ9BY32 194 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 STRADBQ9C0K7 418 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 SP140LQ9H930 580 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 FBXO2Q9UK22 296 aaPredicted RBP0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ELF5Q9UKW6 265 aaPredicted RBP0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 CHKBQ9Y259 395 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 WDR83OSQ9Y284 106 aa0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 MRPS18CQ9Y3D5 142 aaKnown RBP0.96□□□□□ -2.26
RNU6-1228P-201ENST00000391014 IGSF1Q8N6C5 1336 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 KLF18A0A0U1RQI7 1052 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 A0A1B0GTH9 108 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 LRRC72A6NJI9 287 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 CDRT15L2A8MXV6 281 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 F8VVB4 439 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 F8VWA3 439 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 PANO1I0J062 215 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 RTCAO00442 366 aaKnown RBP0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TNFSF11O14788 317 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TMEM63AO94886 807 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ADORA3P0DMS8 318 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ODC1P11926 461 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 LAMP2P13473 410 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 FASP25445 335 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ZNF133P52736 654 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 OR1D5P58170 312 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 DCDC1P59894 354 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TIMM50Q3ZCQ8 353 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 GPR157Q5UAW9 335 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 SNX30Q5VWJ9 437 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 NOL8Q76FK4 1167 aaKnown RBP0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TMEM173Q86WV6 379 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 CARM1Q86X55 608 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ZNF595Q8IYB9 648 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ENTHD1Q8IYW4 607 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 GPC2Q8N158 579 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 BEST4Q8NFU0 473 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 OR4K1Q8NGD4 311 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 KIR2DL5BQ8NHK3 375 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 KIAA1524Q8TCG1 905 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 KCNE4Q8WWG9 221 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 PIK3R3Q92569 461 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 SYN2Q92777 582 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 C11orf52Q96A22 123 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 FAM71F1Q96KD3 344 aaPredicted RBP0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 MAGEB18Q96M61 343 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 CDRT15Q96T59 188 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 SCRT1Q9BWW7 348 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 MOB1AQ9H8S9 216 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 PILRAQ9UKJ1 303 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 ZNF148Q9UQR1 794 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 PLEKHA6Q9Y2H5 1048 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 PADI2Q9Y2J8 665 aa0.95□□□□□ -2.26
RNU6-1228P-201ENST00000391014 RNF123Q5XPI4 1314 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 SALL1Q9NSC2 1324 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 BCLAF3A2AJT9 711 aaKnown RBP0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 NEMP2A6NFY4 417 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TRIM49D1C9J1S8 452 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 SRPX2O60687 465 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 DANCRP0C864 163 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 CD1EP15812 388 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 DNASE1P24855 282 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TM4SF1P30408 202 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 MATKP42679 507 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 PPM1FP49593 454 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 VAMP7P51809 220 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 MAPK12P53778 367 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 MFAP4P55083 255 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 NAAAQ02083 359 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 VEZF1Q14119 521 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 CRYMQ14894 314 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 TMEM266Q2M3C6 531 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 MCMDC2Q4G0Z9 681 aa0.94□□□□□ -2.26
RNU6-1228P-201ENST00000391014 SLC22A6Q4U2R8 563 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms