RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 MAD2L1Q13257 205 aaPredicted RBP11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 TIGD2Q4W5G0 525 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 PAGE2BQ5JRK9 111 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 CACHD1Q5VU97 1274 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 IYDQ6PHW0 289 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 RNF148Q8N7C7 305 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 MFSD2AQ8NA29 543 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 GPR156Q8NFN8 814 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 LCN9Q8WX39 176 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 EGLN2Q96KS0 407 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 TSSK3Q96PN8 268 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 CDRT15Q96T59 188 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 EHD1Q9H4M9 534 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 KIR3DX1Q9H7L2 352 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 TM9SF3Q9HD45 589 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 ZIM2Q9NZV7 527 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 MAP10Q9P2G4 905 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 APOBEC3BQ9UH17 382 aaKnown RBP11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 KLHL20Q9Y2M5 609 aa11.73□□□□□ -0.53
SPTBN1-203ENST00000389980 IGKV1-8A0A0C4DH67 115 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 SERTM1A2A2V5 107 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 ANGPT2O15123 496 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 PRPH2P23942 346 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 MSX2P35548 267 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 MRPL19P49406 292 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 CYP4F2P78329 520 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 MRPS35P82673 323 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 GRIK2Q13002 908 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 RCAN2Q14206 197 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 HIST2H2ACQ16777 129 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 HIST2H2AA3Q6FI13 130 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 C16orf89Q6UX73 402 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 TMIGD1Q6UXZ0 262 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 ADCK2Q7Z695 626 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 HPS6Q86YV9 775 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 LAS2Q8IYD9 372 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 ANKRD53Q8N9V6 530 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 GFM2Q969S9 779 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 CCDC124Q96CT7 223 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 LRRC61Q9BV99 259 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 GSDMCQ9BYG8 508 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 OR51B5Q9H339 312 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 NDUFAF1Q9Y375 327 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 PCDHGA7Q9Y5G6 932 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 TP53BP1Q12888 1972 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 PI4KAP42356 2102 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 FAM234BA2RU67 622 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 TLR4O00206 839 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 LRATO95237 230 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 SDC1P18827 310 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 FNTBP49356 437 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 CSNK1EP49674 416 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 RACK1P63244 317 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 PLIN5Q00G26 463 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 GPR18Q14330 331 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 RCN1Q15293 331 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 SMU1Q2TAY7 513 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 PAGE3Q5JUK9 113 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 NOXRED1Q6NXP6 359 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 VN1R5Q7Z5H4 357 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 AMIGO1Q86WK6 493 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 ZNF761Q86XN6 746 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 TRIM48Q8IWZ4 208 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 PGAM4Q8N0Y7 254 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 NAGSQ8N159 534 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 ARHGAP24Q8N264 748 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 FBXL6Q8N531 539 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 C1orf52Q8N6N3 182 aaKnown RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 DRAXINQ8NBI3 349 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 C1orf216Q8TAB5 229 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 ZNF570Q96NI8 536 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 RAB11FIP5Q9BXF6 653 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 TRIM8Q9BZR9 551 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 DPY30Q9C005 99 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 PCBD2Q9H0N5 130 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 MMADHCQ9H3L0 296 aaPredicted RBP11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 BRF2Q9HAW0 419 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 DMRT3Q9NQL9 472 aa11.72□□□□□ -0.53
SPTBN1-203ENST00000389980 TTC28Q96AY4 2481 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 CCDC154A6NI56 674 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 BTN3A3O00478 584 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 PRICKLE3O43900 615 aaPredicted RBP11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 LCMT2O60294 686 aaKnown RBP11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 GBAP04062 536 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 HOXB3P14651 431 aaPredicted RBP11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 CCR8P51685 355 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 RAP1GDS1P52306 607 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 PSME3P61289 254 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 PRDX1Q06830 199 aaKnown RBP11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 ACSM2AQ08AH3 577 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 SRSF5Q13243 272 aaKnown RBP11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 LAPTM5Q13571 262 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 CAPRIN1Q14444 709 aaKnown RBP11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 PLCL1Q15111 1095 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 ACSM2BQ68CK6 577 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 FAM46DQ8NEK8 389 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 ABHD11Q8NFV4 315 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 CDC26Q8NHZ8 85 aa11.71□□□□□ -0.53
SPTBN1-203ENST00000389980 REPS1Q96D71 796 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms