RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 UPK3BL2E5RIL1 263 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 TLR4O00206 839 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 DNTTP04053 509 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 FOXA1P55317 472 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 VBP1P61758 197 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 KIAA1324Q6UXG2 1013 aaKnown RBP15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 IKBIPQ70UQ0 350 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 HDDC2Q7Z4H3 204 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 NUDT13Q86X67 352 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 WFIKKN2Q8TEU8 576 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 NUS1Q96E22 293 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 MOV10Q9HCE1 1003 aaKnown RBP15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 SRRDQ9UH36 339 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 RREB1Q92766 1687 aa15.66■□□□□ 0.1
PTPRN2-201ENST00000389413 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 LDB2O43679 373 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 ITGB1P05556 798 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 CHRM5P08912 532 aaPredicted RBP15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 CMPK1P30085 196 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 HSD17B2P37059 387 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 GALNT13Q8IUC8 556 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 CNIH3Q8TBE1 160 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 RNF6Q9Y252 685 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 SH3PXD2BA1X283 911 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 FABP12A6NFH5 140 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 HTR6P50406 440 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 ATP12AP54707 1039 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 RPS13P62277 151 aaKnown RBP15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 ART5Q96L15 291 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 MGME1Q9BQP7 344 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 UBAP1Q9NZ09 502 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 SPO11Q9Y5K1 396 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 TCRBV3S1A0A5B6 114 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 H1F0P07305 194 aaKnown RBP15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 AMD1P17707 334 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 KDELR2P33947 212 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 CRB2Q5IJ48 1285 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 PAGE3Q5JUK9 113 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 KLHL6Q8WZ60 621 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 UFD1Q92890 307 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 TMEM125Q96AQ2 219 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 TMEM27Q9HBJ8 222 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 TNRC6CQ9HCJ0 1690 aaKnown RBP15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 JUNP05412 331 aaKnown RBP15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 FYNP06241 537 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 WASP42768 502 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 ATP13A5Q4VNC0 1218 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 LIPJQ5W064 366 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 ANKRD26P1Q6NSI1 321 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 NANOGNBQ7Z5D8 188 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 FAM98AQ8NCA5 519 aaKnown RBP15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 TMIGD2Q96BF3 282 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 ANKRA2Q9H9E1 313 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 TMEM45AQ9NWC5 275 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 ERVW-1Q9UQF0 538 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 USP3Q9Y6I4 520 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 COLEC10Q9Y6Z7 277 aa15.65■□□□□ 0.1
PTPRN2-201ENST00000389413 CITO14578 2027 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 RCVRNP35243 200 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 CCR8P51685 355 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 PIGFQ07326 219 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 CXorf57Q6NSI4 855 aaKnown RBP15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 BRINP2Q9C0B6 783 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 OR5F1O95221 314 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 CLDN8P56748 225 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 PSRC1Q6PGN9 363 aaPredicted RBP15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 NCEH1Q6PIU2 408 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 SLC22A16Q86VW1 577 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 MAGIXQ9H6Y5 334 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 IL1RAPQ9NPH3 570 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 CTPS2Q9NRF8 586 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 WBP4O75554 376 aaKnown RBP15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 HLA-DQA2P01906 255 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 SOD2P04179 222 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 TAS2R50P59544 299 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 PMS2P3Q13401 168 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 MADCAM1Q13477 382 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 PON2Q15165 354 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 Q6ZVL8 140 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 MAVSQ7Z434 540 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 CPA6Q8N4T0 437 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 OR13J1Q8NGT2 312 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 CYB5D2Q8WUJ1 264 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 NT5C3BQ969T7 300 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 CAMK1GQ96NX5 476 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 OR51B5Q9H339 312 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 HCN4Q9Y3Q4 1203 aa15.64■□□□□ 0.09
PTPRN2-201ENST00000389413 HMX2A2RU54 273 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 INPPL1O15357 1258 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 APODP05090 189 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 ARCN1P48444 511 aaKnown RBP15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 SLC9A5Q14940 896 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 PCBP2Q15366 365 aaKnown RBP eCLIP15.63■□□□□ 0.093e-6■■■■□ 25.1
PTPRN2-201ENST00000389413 TMEM44Q2T9K0 475 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 ZNF311Q5JNZ3 666 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 TUBA3EQ6PEY2 450 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 ENPP6Q6UWR7 440 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 CEACAM20Q6UY09 585 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 AQP11Q8NBQ7 271 aa15.63■□□□□ 0.09
PTPRN2-201ENST00000389413 TRIB2Q92519 343 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms