RNA–Protein interactions for RNA: ENST00000385297.1

MIR548A3-201, Transcript of microRNA 548a-3, humanhuman

BASIC

Gene MIR548A3, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A3-201ENST00000385297 CTCFP49711 727 aaPredicted RBP0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 CCR5P51681 352 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 DCDC1P59894 354 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 CXCL6P80162 114 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 PPP2R2BQ00005 443 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 PRKCEQ02156 737 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 ZNF415Q09FC8 603 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 EGFEM1PQ0D2K5 195 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 CSTF3Q12996 717 aaKnown RBP0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 EIF4A2Q14240 407 aaKnown RBP0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 MPPED2Q15777 294 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 ALDH1L2Q3SY69 923 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 SLC22A15Q8IZD6 547 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 GPR137CQ8N3F9 429 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 THAP8Q8NA92 274 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 PAPD5Q8NDF8 572 aaKnown RBP0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 TADA1Q96BN2 335 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 SAAL1Q96ER3 474 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 OR6C1Q96RD1 312 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 PAGR1Q9BTK6 254 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 THYN1Q9P016 225 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 PHF11Q9UIL8 331 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 CAMK2AQ9UQM7 478 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 R4GN57 208 aa0.03□□□□□ -2.4
MIR548A3-201ENST00000385297 MYH14Q7Z406 1995 aaKnown RBP0.03□□□□□ -2.41
MIR548A3-201ENST00000385297 PCNX2A6NKB5 2137 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 BRWD3Q6RI45 1802 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 MFSD2BA6NFX1 497 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 GLTPD2A6NH11 291 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 CCT8L1PA6NM43 557 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 HEPACAM2A8MVW5 462 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 DLGAP1O14490 977 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 TSPAN4O14817 238 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 SSX4O60224 188 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 NDUFS3O75489 264 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 OR6B1O95007 311 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 ATP1B1P05026 303 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 RNASE2P10153 161 aaKnown RBP0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 PNMTP11086 282 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 CCNE1P24864 410 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 GPR183P32249 361 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 SLC25A1P53007 311 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 HMGCS2P54868 508 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 SLC12A3P55017 1021 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 LMOD3Q0VAK6 560 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 FRG1Q14331 258 aaKnown RBP0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 PCGF3Q3KNV8 242 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 DPCR1Q3MIW9 517 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 AGAP6Q5VW22 663 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 KRT79Q5XKE5 535 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 ANO1Q5XXA6 986 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 TMEM198Q66K66 360 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 OLFM4Q6UX06 510 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 TMTC3Q6ZXV5 915 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 OAFQ86UD1 273 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 C14orf178Q8N769 122 aaPredicted RBP0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 C16orf74Q96GX8 76 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 FAM20AQ96MK3 541 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 RUNDC3BQ96NL0 473 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 NR1H4Q96RI1 486 aaPredicted RBP0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 CCT8L2Q96SF2 557 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 ELAC2Q9BQ52 826 aaKnown RBP0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 DPAGT1Q9H3H5 408 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 ZNF229Q9UJW7 825 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 NME7Q9Y5B8 376 aa0.02□□□□□ -2.41
MIR548A3-201ENST00000385297 IGHV3-35A0A0C4DH35 117 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 A0A0U1RQS6 177 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 ANKRD62A6NC57 917 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 A8MX80 341 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 TNFSF12O43508 249 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 AIREO43918 545 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 STBD1O95210 358 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 ACTN1P12814 892 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 CD34P28906 385 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 TPD52P55327 224 aaPredicted RBP0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 CSTF1Q05048 431 aaKnown RBP0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 UBE3AQ05086 875 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 GPNMBQ14956 572 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 CCNG2Q16589 344 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 CA9Q16790 459 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 PCK2Q16822 640 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 CCDC14Q49A88 953 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 GPR33Q49SQ1 333 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 FAAH2Q6GMR7 532 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 ARMCX5Q6P1M9 558 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 RFWD3Q6PCD5 774 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 SCARA5Q6ZMJ2 495 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 TOGARAM2Q6ZUX3 1019 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 TGIF2LYQ8IUE0 185 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 OR9Q2Q8NGE9 314 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 JAKMIP2Q96AA8 810 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 FAM149B1Q96BN6 582 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 APOPT1Q96IL0 206 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 VCXQ9H320 206 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 TLE6Q9H808 572 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 GKN1Q9NS71 199 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 ZNF586Q9NXT0 402 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 KLK11Q9UBX7 282 aa0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 ZNF346Q9UL40 294 aaKnown RBP0.01□□□□□ -2.41
MIR548A3-201ENST00000385297 GRIP1Q9Y3R0 1128 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms