RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 STK10O94804 968 aaKnown RBP16.33■□□□□ 0.2
HMGN1-203ENST00000380748 NME2P22392 152 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 CMPK1P30085 196 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 IQCB1Q15051 598 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 CCDC181Q5TID7 509 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 CLEC17AQ6ZS10 378 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 ANKRD37Q7Z713 158 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 PAQR7Q86WK9 346 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 RCOR2Q8IZ40 523 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 RAB42Q8N4Z0 105 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 HORMAD2Q8N7B1 307 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 OR13J1Q8NGT2 312 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 RND1Q92730 232 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 LRRC45Q96CN5 670 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 PPP1R2P1Q96PQ5 205 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 OR2A5Q96R48 311 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 PLCD4Q9BRC7 762 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 CARD6Q9BX69 1037 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 C19orf25Q9UFG5 118 aaPredicted RBP16.33■□□□□ 0.2
HMGN1-203ENST00000380748 PLEKHA6Q9Y2H5 1048 aa16.33■□□□□ 0.2
HMGN1-203ENST00000380748 R3HDM2Q9Y2K5 976 aaKnown RBP16.33■□□□□ 0.2
HMGN1-203ENST00000380748 F8W8V4 182 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 GOT2P00505 430 aaKnown RBP16.32■□□□□ 0.2
HMGN1-203ENST00000380748 RBP3P10745 1247 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 UBASH3AP57075 661 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 EIF3EP60228 445 aaKnown RBP16.32■□□□□ 0.2
HMGN1-203ENST00000380748 ADAM8P78325 824 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 SEMA3AQ14563 771 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 EXT1Q16394 746 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 TMEM211Q6ICI0 200 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 DARS2Q6PI48 645 aaKnown RBP16.32■□□□□ 0.2
HMGN1-203ENST00000380748 SLC5A8Q8N695 610 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 OR9A4Q8NGU2 314 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 M1APQ8TC57 530 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 SEC16BQ96JE7 1060 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 MDFIQ99750 246 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 ANP32EQ9BTT0 268 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 TSSK1BQ9BXA7 367 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 POLDIP3Q9BY77 421 aaKnown RBP16.32■□□□□ 0.2
HMGN1-203ENST00000380748 MMP25Q9NPA2 562 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 SLC2A6Q9UGQ3 507 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 ALG6Q9Y672 507 aa16.32■□□□□ 0.2
HMGN1-203ENST00000380748 FAM237BA0A1B0GVD1 139 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 SOWAHDA6NJG2 315 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 TFECO14948 347 aaPredicted RBP16.31■□□□□ 0.2
HMGN1-203ENST00000380748 KLK8O60259 260 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 CDC40O60508 579 aaKnown RBP eCLIP16.31■□□□□ 0.2
HMGN1-203ENST00000380748 CTAG2O75638 210 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 STATHP02808 62 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 RFC3P40938 356 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 NAA25Q14CX7 972 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 TMED2Q15363 201 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 SUSD1Q6UWL2 747 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 TAOK1Q7L7X3 1001 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 PRSS41Q7RTY9 318 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 ZNF227Q86WZ6 799 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 SKA2Q8WVK7 121 aaPredicted RBP16.31■□□□□ 0.2
HMGN1-203ENST00000380748 KRT35Q92764 455 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 RERGQ96A58 199 aaPredicted RBP16.31■□□□□ 0.2
HMGN1-203ENST00000380748 CDCP1Q9H5V8 836 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 MRPS30Q9NP92 439 aaKnown RBP16.31■□□□□ 0.2
HMGN1-203ENST00000380748 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.31■□□□□ 0.21e-14■■■□□ 15.4
HMGN1-203ENST00000380748 CSPG4Q6UVK1 2322 aa16.31■□□□□ 0.2
HMGN1-203ENST00000380748 DNAJC13O75165 2243 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 PHF3Q92576 2039 aaKnown RBP16.3■□□□□ 0.2
HMGN1-203ENST00000380748 PROM1O43490 865 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 PHF2O75151 1096 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 METTL18O95568 372 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 CYC1P08574 325 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 PMPCAQ10713 525 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 FAM53BQ14153 422 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 SKOR2Q2VWA4 1001 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-203ENST00000380748 ZNF425Q6IV72 752 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 PAPD4Q6PIY7 484 aaKnown RBP16.3■□□□□ 0.2
HMGN1-203ENST00000380748 AFTPHQ6ULP2 937 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 ZNF534Q76KX8 674 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 BIVMQ86UB2 503 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 GSDMBQ8TAX9 411 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 ALPK1Q96QP1 1244 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 TTC1Q99614 292 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 GPATCH1Q9BRR8 931 aaKnown RBP16.3■□□□□ 0.2
HMGN1-203ENST00000380748 TP63Q9H3D4 680 aaPredicted RBP16.3■□□□□ 0.2
HMGN1-203ENST00000380748 LRRC40Q9H9A6 602 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 SPATA7Q9P0W8 599 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 HCN3Q9P1Z3 774 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 PCYOX1Q9UHG3 505 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 TSR3Q9UJK0 312 aaKnown RBP16.3■□□□□ 0.2
HMGN1-203ENST00000380748 L3MBTL1Q9Y468 752 aa16.3■□□□□ 0.2
HMGN1-203ENST00000380748 HS6ST1O60243 411 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 DNASE1P24855 282 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 TPP2P29144 1249 aaPredicted RBP16.29■□□□□ 0.2
HMGN1-203ENST00000380748 XCR1P46094 333 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 AVPR1BP47901 424 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 AGTR2P50052 363 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 DLX5P56178 289 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 NUP107P57740 925 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 TCEAL1Q15170 157 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 SFT2D3Q587I9 215 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 CMPK2Q5EBM0 449 aa16.29■□□□□ 0.2
HMGN1-203ENST00000380748 LDB1Q86U70 411 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms