RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PRKAR1AP10644 381 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 CCND1P24385 295 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 CRABP2P29373 138 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 GMPRP36959 345 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 RNF144AP50876 292 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ATP6V0D1P61421 351 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 CYP4F2P78329 520 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 NFATC3Q12968 1075 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 CSHL1Q14406 222 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ZKSCAN8Q15776 578 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 FAM153CQ494X1 144 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 SDK2Q58EX2 2172 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 COLEC12Q5KU26 742 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 WASHC2DQ5SRD0 308 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 MROH9Q5TGP6 573 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 C1orf189Q5VU69 101 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 FRMPD2BQ6IN97 320 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 CAPN13Q6MZZ7 669 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 TMEM214Q6NUQ4 689 aaKnown RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 MRPL14Q6P1L8 145 aaKnown RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 C16orf46Q6P387 395 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 TLDC1Q6P9B6 456 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 RNF44Q7L0R7 432 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 TAOK1Q7L7X3 1001 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ADAMTSL2Q86TH1 951 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 TBC1D1Q86TI0 1168 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 PAQR7Q86WK9 346 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 DSELQ8IZU8 1212 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ZNF295-AS1Q8N0V1 137 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 TTC29Q8NA56 475 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ANKRD7Q92527 254 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 PYCR2Q96C36 320 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 LRFN5Q96NI6 719 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 RUFY1Q96T51 708 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ZFYVE21Q9BQ24 234 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 PLCD4Q9BRC7 762 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 GRIP2Q9C0E4 1043 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 PCBD2Q9H0N5 130 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 CHST8Q9H2A9 424 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 AKIRIN1Q9H9L7 192 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 TXLNGQ9NUQ3 528 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 PCMTD2Q9NV79 361 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 CUEDC1Q9NWM3 386 aaPredicted RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 ANKMY1Q9P2S6 941 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 DHCR7Q9UBM7 475 aaKnown RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 SRPK3Q9UPE1 567 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 OARD1Q9Y530 152 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 KLK4Q9Y5K2 254 aa8.84□□□□□ -0.99
HMGN1-202ENST00000380747 MRPS18BQ9Y676 258 aaKnown RBP8.84□□□□□ -0.99
HMGN1-202ENST00000380747 UTP20O75691 2785 aaKnown RBP8.84□□□□□ -1
HMGN1-202ENST00000380747 LOC105369274A0A096LPK9 316 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 IGKV1-8A0A0C4DH67 115 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 LOC102723532A0A0G2JNH3 316 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 NCF1BA6NI72 391 aaPredicted RBP8.83□□□□□ -1
HMGN1-202ENST00000380747 NCF1CA8MVU1 366 aaPredicted RBP8.83□□□□□ -1
HMGN1-202ENST00000380747 C21orf140B9A014 251 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 H3BMH7 237 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 H7BY64 318 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 HAT1O14929 419 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 NKX2-8O15522 239 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 SRPX2O60687 465 aaPredicted RBP8.83□□□□□ -1
HMGN1-202ENST00000380747 WISP3O95389 354 aaPredicted RBP8.83□□□□□ -1
HMGN1-202ENST00000380747 ANXA5P08758 320 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 NCF1P14598 390 aaPredicted RBP8.83□□□□□ -1
HMGN1-202ENST00000380747 CD1DP15813 335 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 AGXTP21549 392 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 ALAS2P22557 587 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 F8A1P23610 371 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 GPC1P35052 558 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 RORAP35398 523 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 MSH2P43246 934 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 RPS15P62841 145 aaKnown RBP8.83□□□□□ -1
HMGN1-202ENST00000380747 GRM7Q14831 915 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 PPP1R3AQ16821 1122 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 LINC00303Q3SY05 128 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 TCTE1Q5JU00 501 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 ZNF425Q6IV72 752 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 LCN10Q6JVE6 187 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 FBXO42Q6P3S6 717 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 LCTLQ6UWM7 567 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 TTLL10Q6ZVT0 673 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 TRMT10CQ7L0Y3 403 aaKnown RBP8.83□□□□□ -1
HMGN1-202ENST00000380747 C17orf64Q86WR6 236 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 GPSM1Q86YR5 675 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 PLD3Q8IV08 490 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 OR4N4Q8N0Y3 316 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 OR56A3Q8NH54 315 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 STARD8Q92502 1023 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 EXT2Q93063 718 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 SLC45A3Q96JT2 553 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 PRAP1Q96NZ9 151 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 PAFAH2Q99487 392 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 HAUS8Q9BT25 410 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 SGPP1Q9BX95 441 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 FUT8Q9BYC5 575 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 NMRAL1Q9HBL8 299 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 SNX15Q9NRS6 342 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 NDOR1Q9UHB4 597 aa8.83□□□□□ -1
HMGN1-202ENST00000380747 GPN3Q9UHW5 284 aaPredicted RBP8.83□□□□□ -1
HMGN1-202ENST00000380747 KCND3Q9UK17 655 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms