RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ZNF583Q96ND8 569 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 GAS2L1Q99501 681 aaPredicted RBP19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 INPP5KQ9BT40 448 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 THUMPD3Q9BV44 507 aaKnown RBP19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 IKZF5Q9H5V7 419 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 DMRT3Q9NQL9 472 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 MAN2B2Q9Y2E5 1009 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 PLXND1Q9Y4D7 1925 aa19.11■□□□□ 0.65
PDLIM5-205ENST00000380180 TRBV5-3A0A0A0MS03 114 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 FPGTO14772 594 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 ERN1O75460 977 aaKnown RBP19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 HOXC4P09017 264 aaPredicted RBP19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 KIR3DL1P43629 444 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 CYP4F3Q08477 520 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 MTAPQ13126 283 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 TMIGD1Q6UXZ0 262 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 DNAJB8Q8NHS0 232 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 FAM110BQ8TC76 370 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 LRTOMTQ8WZ04 291 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 SMPDL3AQ92484 453 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 ITCHQ96J02 903 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 BMFQ96LC9 184 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 CAMK1GQ96NX5 476 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 CARS2Q9HA77 564 aaKnown RBP19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 PRDM8Q9NQV8 689 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 CCM2LQ9NUG4 571 aaPredicted RBP19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 LRCH1Q9Y2L9 728 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 PCDHB3Q9Y5E6 796 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 A0A096LPI6 279 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 A0A1W2PPV9 198 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 LRRC72A6NJI9 287 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 OR52A4PA6NMU1 304 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 PSMB5P28074 263 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 AQP4P55087 323 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 KIAA1024LP59773 190 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 DPY19L1Q2PZI1 675 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 AASDHQ4L235 1098 aaPredicted RBP19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 LRIF1Q5T3J3 769 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 ENPP7Q6UWV6 458 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 LINC01555Q8NAE3 123 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 DENND6BQ8NEG7 585 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 UBE2E3Q969T4 207 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 EFHD1Q9BUP0 239 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 OR51B5Q9H339 312 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 ARMC1Q9NVT9 282 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 EBF1Q9UH73 591 aa19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 ARHGEF17Q96PE2 2063 aaPredicted RBP19.1■□□□□ 0.65
PDLIM5-205ENST00000380180 DHRS12A0PJE2 317 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 PDZK1P1A8MUH7 402 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 SAP18O00422 153 aaKnown RBP19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 GSNP06396 782 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 HRH2P25021 359 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 PIK3CBP42338 1070 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 CDKN2CP42773 168 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 C21orf58P58505 322 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 SRSF11Q05519 484 aaKnown RBP19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 UAP1L1Q3KQV9 507 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 PROSER1Q86XN7 944 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 KRT78Q8N1N4 520 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 GOLM1Q8NBJ4 401 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 OR10A6Q8NH74 314 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 SH3GL1Q99961 368 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 REXO4Q9GZR2 422 aaKnown RBP19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 PCBD2Q9H0N5 130 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 CUEDC1Q9NWM3 386 aaPredicted RBP19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 AURKCQ9UQB9 309 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 TSC22D4Q9Y3Q8 395 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 DTNAQ9Y4J8 743 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 TRIOO75962 3097 aa19.09■□□□□ 0.65
PDLIM5-205ENST00000380180 GNG14A0A1W2PPG7 69 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 CAPNS1P04632 268 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 COX7A2P14406 83 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 HNRNPA2B1P22626 353 aaKnown RBP19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 PTPN6P29350 595 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 TIA1P31483 386 aaKnown RBP eCLIP19.08■□□□□ 0.654e-7■■■■■ 27.1
PDLIM5-205ENST00000380180 KRT33BQ14525 404 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 NFATC4Q14934 902 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 RBBP5Q15291 538 aaKnown RBP19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 SKIV2LQ15477 1246 aaKnown RBP19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 TPRG1LQ5T0D9 272 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 IRAK1BP1Q5VVH5 260 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 GLYATQ6IB77 296 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 GALNT18Q6P9A2 607 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 Q6ZS52 159 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 ARMCX6Q7L4S7 300 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 RAB42Q8N4Z0 105 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 ADCY4Q8NFM4 1077 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 OR1E3Q8WZA6 343 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 MSANTD3Q96H12 275 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 OR2M4Q96R27 311 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 SEMA6AQ9H2E6 1030 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 XKR8Q9H6D3 395 aa19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 RPF2Q9H7B2 306 aaKnown RBP19.08■□□□□ 0.65
PDLIM5-205ENST00000380180 TCRBV5S2A0A599 114 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 PCDH7O60245 1069 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 TIPRLO75663 272 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 SRFP11831 508 aa19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 HOXB9P17482 250 aaPredicted RBP19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 PSMA4P25789 261 aaKnown RBP19.08■□□□□ 0.64
PDLIM5-205ENST00000380180 OXTRP30559 389 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms