RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 SCAPQ12770 1279 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 KCNJ11Q14654 390 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 IRF4Q15306 451 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 IQCCQ4KMZ1 466 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TMEM196Q5HYL7 178 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 TMEM53Q6P2H8 277 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 POTEHQ6S545 545 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF621Q6ZSS3 439 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 LIX1LQ8IVB5 337 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 PARP8Q8N3A8 854 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 LNX2Q8N448 690 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 STYXQ8WUJ0 223 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 BCL7CQ8WUZ0 217 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CYGBQ8WWM9 190 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CMTM5Q96DZ9 223 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 PLA2G2FQ9BZM2 168 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 SOX17Q9H6I2 414 aaPredicted RBP6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CPNE7Q9UBL6 633 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 FBXO5Q9UKT4 447 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 CAMK2AQ9UQM7 478 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 EFR3BQ9Y2G0 817 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 AP4B1Q9Y6B7 739 aa6.35□□□□□ -1.39
NEDD9-202ENST00000379446 FASNP49327 2511 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 SMIM31A0A1B0GVY4 71 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ANKRD66B4E2M5 251 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 H3BUI4 141 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CLOCKO15516 846 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 RAD1O60671 282 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ABLIM3O94929 683 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 SERPINE1P05121 402 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CCDC166P0CW27 439 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 HK3P52790 923 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 MANFP55145 182 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 YPEL5P62699 121 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CLDN10P78369 228 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 TRAF2Q12933 501 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ECH1Q13011 328 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CSRP2Q16527 193 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 FHL5Q5TD97 284 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 SUSD1Q6UWL2 747 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 XKR5Q6UX68 686 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 SNX20Q7Z614 316 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 PAQR7Q86WK9 346 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 DAZLQ92904 295 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 APOLD1Q96LR9 279 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 WDR83Q9BRX9 315 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 TMEM79Q9BSE2 394 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 RMND5AQ9H871 391 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 MID1IP1Q9NPA3 183 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 PRTFDC1Q9NRG1 225 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 PCDHB10Q9UN67 800 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 AP1M2Q9Y6Q5 423 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CDK5RAP2Q96SN8 1893 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 DPM1O60762 260 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ATXN1LP0C7T5 689 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ATP1B2P14415 290 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 GABRG2P18507 467 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ITGB7P26010 798 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 HOXC13P31276 330 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 RPL4P36578 427 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CCR8P51685 355 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 MAPK12P53778 367 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 EIF3IQ13347 325 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 PRAMEF13Q5VWM6 474 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ENPP6Q6UWR7 440 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CYP2R1Q6VVX0 501 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 TMPPEQ6ZT21 453 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 USP30Q70CQ3 517 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 SPATA6LQ8N4H0 392 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 UBR7Q8N806 425 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 OR5L2Q8NGL0 311 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 APOBEC4Q8WW27 367 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF354BQ96LW1 612 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF599Q96NL3 588 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CEP44Q9C0F1 390 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ZBTB20Q9HC78 741 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 SSU72Q9NP77 194 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 KRCC1Q9NPI7 259 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ZDHHC3Q9NYG2 299 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 NDUFA13Q9P0J0 144 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 EPHA6Q9UF33 1036 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CFL2Q9Y281 166 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 PCDHGA6Q9Y5G7 932 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 A0A1W2PPC4 97 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ISPDA4D126 451 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CPNE3O75131 537 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ULK1O75385 1050 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 COX6B1P14854 86 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ZNF37AP17032 561 aaPredicted RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 ATP5A1P25705 553 aaKnown RBP6.34□□□□□ -1.39
NEDD9-202ENST00000379446 HSD17B2P37059 387 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 CLCN7P51798 805 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 NHLH1Q02575 133 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 LRP8Q14114 963 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 GPR33Q49SQ1 333 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 DCUN1D3Q8IWE4 304 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 RASGEF1AQ8N9B8 481 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 GALNT6Q8NCL4 622 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 SLC22A8Q8TCC7 542 aa6.34□□□□□ -1.39
NEDD9-202ENST00000379446 GPR151Q8TDV0 419 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms