RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 COX7A2P14406 83 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 KELP23276 732 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 TACR1P25103 407 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 ACADLP28330 430 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PTPN6P29350 595 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 HSD17B2P37059 387 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 HPCAL1P37235 193 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 RPL3P39023 403 aaKnown RBP10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 RPS9P46781 194 aaKnown RBP10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 GZMMP51124 257 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PHC1P78364 1004 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PLIN5Q00G26 463 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 SIGLEC14Q08ET2 396 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 CNTN1Q12860 1018 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 MERTKQ12866 999 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 EPS8Q12929 822 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 ENPP2Q13822 863 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 CCSMST1Q4G0I0 132 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 SLC44A4Q53GD3 710 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PIP5KL1Q5T9C9 394 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 ANXA8L1Q5VT79 327 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 GALNT18Q6P9A2 607 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 TRMT11Q7Z4G4 463 aaKnown RBP10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 SERPINA11Q86U17 422 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PDZD3Q86UT5 571 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 LAS2Q8IYD9 372 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 EID3Q8N140 333 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PGBD3Q8N328 593 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 OXR1Q8N573 874 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 SMRP1Q8NCR6 262 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PHC3Q8NDX5 983 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 VPS37AQ8NEZ2 397 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 OR7G3Q8NG95 312 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 FAM110BQ8TC76 370 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 CHTF18Q8WVB6 975 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 FIG4Q92562 907 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 RAD51AP1Q96B01 352 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 ELSPBP1Q96BH3 223 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 RDH12Q96NR8 316 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 TSC22D3Q99576 134 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PRRX2Q99811 253 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 YIPF3Q9GZM5 350 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 PIF1Q9H611 641 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 CCDC177Q9NQR7 707 aaPredicted RBP10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 SMPD3Q9NY59 655 aaPredicted RBP10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 DNAJB9Q9UBS3 223 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 ADGRE2Q9UHX3 823 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 BTNL2Q9UIR0 455 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 MYRFQ9Y2G1 1151 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 GMEB1Q9Y692 573 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 CACNA1BQ00975 2339 aa10.11□□□□□ -0.79
POLR2J3-201ENST00000379340 KRT87PA6NCN2 255 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 PRR23AA6NEV1 266 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 PROB1E7EW31 1015 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 H0YAE9 185 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 FPGTO14772 594 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 SCAMP2O15127 329 aaKnown RBP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 CREG1O75629 220 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 EPN2O95208 641 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 H6PDO95479 791 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 PCNAP12004 261 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 ZNF23P17027 643 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 ZNF8P17098 575 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 PAX7P23759 505 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 TIA1P31483 386 aaKnown RBP eCLIP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 NR1H2P55055 460 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 TUBA4AP68366 448 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 BIRC2Q13490 618 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 DDX39BQ13838 428 aaKnown RBP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 MYBPC3Q14896 1274 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 ARHGAP19Q14CB8 494 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 UGT8Q16880 541 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 SLC36A3Q495N2 470 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 FOXB2Q5VYV0 432 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 OR4F3Q6IEY1 312 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 PNCKQ6P2M8 343 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 LCTLQ6UWM7 567 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 DNAJC14Q6Y2X3 702 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 GCNT7Q6ZNI0 430 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 LPCAT2Q7L5N7 544 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 TMPRSS11BQ86T26 416 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 TRIM74Q86UV6 250 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 LRRTM4Q86VH4 590 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 ZNF547Q8IVP9 402 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 DCUN1D3Q8IWE4 304 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 LRRC56Q8IYG6 542 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 SVOPLQ8N434 492 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 DHRSXQ8N5I4 330 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 HUS1BQ8NHY5 278 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 NUDT8Q8WV74 236 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 SLC5A11Q8WWX8 675 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 NEIL2Q969S2 332 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 SDCCAG3Q96C92 435 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 SLC47A1Q96FL8 570 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 RMND5BQ96G75 393 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 VPS50Q96JG6 964 aa10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 MTERF1Q99551 399 aaKnown RBP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 REXO4Q9GZR2 422 aaKnown RBP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 RSPH9Q9H1X1 276 aaPredicted RBP10.1□□□□□ -0.79
POLR2J3-201ENST00000379340 OR52A5Q9H2C5 316 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms