RNA–Protein interactions for RNA: ENST00000377017.5

TIMP1-202, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2 BASIC

Gene TIMP1, Length 626 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-202ENST00000377017 GRHL2Q6ISB3 625 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 TMIGD1Q6UXZ0 262 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 ZCCHC23Q6ZST2 131 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 RPS27LQ71UM5 84 aaKnown RBP12.63□□□□□ -0.39
TIMP1-202ENST00000377017 FAM129CQ86XR2 697 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 KIRREL3Q8IZU9 778 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 ZNF655Q8N720 491 aaPredicted RBP12.63□□□□□ -0.39
TIMP1-202ENST00000377017 L3MBTL4Q8NA19 623 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 OR52B6Q8NGF0 335 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 RERGQ96A58 199 aaPredicted RBP12.63□□□□□ -0.39
TIMP1-202ENST00000377017 SEC16BQ96JE7 1060 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 SARGQ9BW04 601 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 NT5DC2Q9H857 520 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 ZBTB26Q9HCK0 441 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 PRM3Q9NNZ6 103 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 MID1IP1Q9NPA3 183 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 GEMIN8Q9NWZ8 242 aaKnown RBP12.63□□□□□ -0.39
TIMP1-202ENST00000377017 TRPS1Q9UHF7 1281 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 LOXL2Q9Y4K0 774 aa12.63□□□□□ -0.39
TIMP1-202ENST00000377017 A0A0J9YVX5 310 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 EFCAB7A8K855 629 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 TXNDC9O14530 226 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 OR1F1O43749 312 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 SRPX2O60687 465 aaPredicted RBP12.62□□□□□ -0.39
TIMP1-202ENST00000377017 ESRRBO95718 433 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 HSPA4LO95757 839 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 JMJD7P0C870 316 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 HGFP14210 728 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 TSPAN8P19075 237 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 HOXD11P31277 338 aaPredicted RBP12.62□□□□□ -0.39
TIMP1-202ENST00000377017 AHRP35869 848 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 ATP1A2P50993 1020 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 MEF2AQ02078 507 aaPredicted RBP12.62□□□□□ -0.39
TIMP1-202ENST00000377017 FOXM1Q08050 763 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 CYP4F3Q08477 520 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 TUBB3Q13509 450 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 C16orf72Q14CZ0 275 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 RBBP5Q15291 538 aaKnown RBP12.62□□□□□ -0.39
TIMP1-202ENST00000377017 ZIC1Q15915 447 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 TCTE1Q5JU00 501 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 C10orf62Q5T681 223 aaPredicted RBP12.62□□□□□ -0.39
TIMP1-202ENST00000377017 TTC19Q6DKK2 380 aaPredicted RBP12.62□□□□□ -0.39
TIMP1-202ENST00000377017 MED27Q6P2C8 311 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 RAB11FIP2Q7L804 512 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 TMPRSS7Q7RTY8 843 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 BPHLQ86WA6 291 aaPredicted RBP12.62□□□□□ -0.39
TIMP1-202ENST00000377017 DNAJC22Q8N4W6 341 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 MFSD9Q8NBP5 474 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 OR4F6Q8NGB9 312 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 OR6Y1Q8NGX8 325 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 OR8K5Q8NH50 307 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 WDR36Q8NI36 951 aaKnown RBP12.62□□□□□ -0.39
TIMP1-202ENST00000377017 LRRC8CQ8TDW0 803 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 AGAP11Q8TF27 550 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 NLNQ9BYT8 704 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 SLC29A3Q9BZD2 475 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 MANSC1Q9H8J5 431 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 ACSS2Q9NR19 701 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 IRAK4Q9NWZ3 460 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 ADGRE2Q9UHX3 823 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 PILRAQ9UKJ1 303 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 RARRES3Q9UL19 164 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 PCDHGA11Q9Y5H2 935 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 ADAMTS20P59510 1910 aa12.62□□□□□ -0.39
TIMP1-202ENST00000377017 KCNE1BA0A087WTH5 132 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 FEZF1A0PJY2 475 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 ANKDD1BA6NHY2 528 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 B4E171 279 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 TMEM150CB9EJG8 249 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 KLF11O14901 512 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 PRAMEF10O60809 474 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 CTSVO60911 334 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 SLC35G6P0C7Q6 338 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 FOLR1P15328 257 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 HMOX2P30519 316 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 BCL6P41182 706 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 TSPAN7P41732 249 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 SCTRP47872 440 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 SLC1A6P48664 564 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 CLDN6P56747 220 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 RAB15P59190 212 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 ABCE1P61221 599 aaKnown RBP12.61□□□□□ -0.39
TIMP1-202ENST00000377017 IFT88Q13099 833 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 TARDBPQ13148 414 aaKnown RBP eCLIP12.61□□□□□ -0.39
TIMP1-202ENST00000377017 IL11RAQ14626 422 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 KCNAB1Q14722 419 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 CPSF6Q16630 551 aaKnown RBP eCLIP12.61□□□□□ -0.39
TIMP1-202ENST00000377017 ARL13AQ5H913 290 aaPredicted RBP12.61□□□□□ -0.39
TIMP1-202ENST00000377017 CUZD1Q86UP6 607 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 MCATQ8IVS2 390 aaKnown RBP12.61□□□□□ -0.39
TIMP1-202ENST00000377017 GPR135Q8IZ08 494 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 CHCHD4Q8N4Q1 142 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 AFAP1L2Q8N4X5 818 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 TRPV3Q8NET8 790 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 MOCOSQ96EN8 888 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 CDK15Q96Q40 435 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 FAM60AQ9NP50 221 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 FGF21Q9NSA1 209 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 THAP1Q9NVV9 213 aa12.61□□□□□ -0.39
TIMP1-202ENST00000377017 SIDT1Q9NXL6 827 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms