RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 ELMO1Q92556 727 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 THUMPD1Q9NXG2 353 aaKnown RBP24.47■■□□□ 1.51
C9orf40-201ENST00000376854 PLXNB3Q9ULL4 1909 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 YY2O15391 372 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 GNRH1P01148 92 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 LAMP1P11279 417 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 ST13P50502 369 aaKnown RBP24.47■■□□□ 1.51
C9orf40-201ENST00000376854 ITGA1P56199 1179 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 SF1Q15637 639 aaKnown RBP24.47■■□□□ 1.51
C9orf40-201ENST00000376854 DGUOKQ16854 277 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 DPY19L3Q6ZPD9 716 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 CMTM8Q8IZV2 173 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 ZFP90Q8TF47 636 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 S100ZQ8WXG8 99 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 MRPS31Q92665 395 aaKnown RBP24.47■■□□□ 1.51
C9orf40-201ENST00000376854 TPD52L3Q96J77 140 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 ZNF558Q96NG5 402 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 ALPK1Q96QP1 1244 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 RASSF1Q9NS23 344 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 DAPK2Q9UIK4 370 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 HS3ST2Q9Y278 367 aa24.47■■□□□ 1.51
C9orf40-201ENST00000376854 NADKO95544 446 aaPredicted RBP24.46■■□□□ 1.51
C9orf40-201ENST00000376854 GAREM2Q75VX8 874 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 WDR20Q8TBZ3 569 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 ZNF300Q96RE9 604 aaPredicted RBP24.46■■□□□ 1.51
C9orf40-201ENST00000376854 TPT1P8Q9HAU6 139 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 CCNB1IP1Q9NPC3 277 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 TRNAU1APQ9NX07 287 aaKnown RBP24.46■■□□□ 1.51
C9orf40-201ENST00000376854 RUVBL1Q9Y265 456 aaKnown RBP24.46■■□□□ 1.51
C9orf40-201ENST00000376854 PCDHB11Q9Y5F2 797 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 KPNA5O15131 536 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 UGDHO60701 494 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 URODP06132 367 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 KRT20P35900 424 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 LINC00299Q6ZSB3 139 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 FAM43BQ6ZT52 329 aaPredicted RBP24.46■■□□□ 1.51
C9orf40-201ENST00000376854 SYNPOQ8N3V7 929 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 ZBTB8BQ8NAP8 495 aaPredicted RBP24.46■■□□□ 1.51
C9orf40-201ENST00000376854 UBE2FQ969M7 185 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 SH3KBP1Q96B97 665 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 CPEB1Q9BZB8 566 aaKnown RBP24.46■■□□□ 1.51
C9orf40-201ENST00000376854 ACOT13Q9NPJ3 140 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 SIRT5Q9NXA8 310 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 FAM8A1Q9UBU6 413 aa24.46■■□□□ 1.51
C9orf40-201ENST00000376854 HLA-FP30511 346 aa24.45■■□□□ 1.51
C9orf40-201ENST00000376854 ACSM2AQ08AH3 577 aa24.45■■□□□ 1.51
C9orf40-201ENST00000376854 CBX3Q13185 183 aa24.45■■□□□ 1.51
C9orf40-201ENST00000376854 VEZF1Q14119 521 aa24.45■■□□□ 1.51
C9orf40-201ENST00000376854 ACSM2BQ68CK6 577 aa24.45■■□□□ 1.51
C9orf40-201ENST00000376854 CCDC71Q8IV32 467 aaPredicted RBP24.45■■□□□ 1.51
C9orf40-201ENST00000376854 NEURL2Q9BR09 285 aa24.45■■□□□ 1.51
C9orf40-201ENST00000376854 HERC2P3Q9BVR0 1158 aa24.45■■□□□ 1.51
C9orf40-201ENST00000376854 SPATA6Q9NWH7 488 aaPredicted RBP24.45■■□□□ 1.51
C9orf40-201ENST00000376854 BTBD3Q9Y2F9 522 aa24.45■■□□□ 1.51
C9orf40-201ENST00000376854 E7EQ34 232 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 POP4O95707 220 aaKnown RBP24.45■■□□□ 1.5
C9orf40-201ENST00000376854 GJA1P17302 382 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 HPCAL1P37235 193 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 SERPINB10P48595 397 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 RPP38P78345 283 aaKnown RBP24.45■■□□□ 1.5
C9orf40-201ENST00000376854 MVKQ03426 396 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 TLE2Q04725 743 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 ZNF33BQ06732 778 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 NPRL3Q12980 569 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 FAHD1Q6P587 224 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 ADCK1Q86TW2 530 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 TRIM74Q86UV6 250 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 TRIM73Q86UV7 250 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 THOC6Q86W42 341 aaKnown RBP24.45■■□□□ 1.5
C9orf40-201ENST00000376854 HS6ST3Q8IZP7 471 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 LMLNQ96KR4 655 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 DUSP26Q9BV47 211 aa24.45■■□□□ 1.5
C9orf40-201ENST00000376854 C9P02748 559 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 NUDT7P0C024 238 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 DOC2AQ14183 400 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 OXA1LQ15070 435 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 PROX2Q3B8N5 592 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 NEK10Q6ZWH5 1172 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 CPA6Q8N4T0 437 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 SCAMP4Q969E2 229 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 MROQ9BYG7 248 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 GPBP1L1Q9HC44 474 aaPredicted RBP24.44■■□□□ 1.5
C9orf40-201ENST00000376854 FZD4Q9ULV1 537 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 TEX28O15482 410 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 MYO1DO94832 1006 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 C21orf58P58505 322 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 SLC7A9P82251 487 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 KCNC3Q14003 757 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 TRIM60Q495X7 471 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 PERM1Q5SV97 790 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 PRSS48Q7RTY5 328 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 KLHL23Q8NBE8 558 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 ASZ1Q8WWH4 475 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 PITX2Q99697 317 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 EMILIN2Q9BXX0 1053 aa24.44■■□□□ 1.5
C9orf40-201ENST00000376854 OBSL1O75147 1896 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 SCAMP2O15127 329 aaKnown RBP24.43■■□□□ 1.5
C9orf40-201ENST00000376854 MRPS14O60783 128 aaKnown RBP24.43■■□□□ 1.5
C9orf40-201ENST00000376854 SERPINB7O75635 380 aa24.43■■□□□ 1.5
C9orf40-201ENST00000376854 NCS1P62166 190 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms