RNA–Protein interactions for RNA: ENST00000376809.9

HLA-A-203, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,611 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-203ENST00000376809 NAA25Q14CX7 972 aa17.11■□□□□ 0.33
HLA-A-203ENST00000376809 RBBP5Q15291 538 aaKnown RBP17.11■□□□□ 0.33
HLA-A-203ENST00000376809 ZRSR2Q15696 482 aaKnown RBP17.11■□□□□ 0.33
HLA-A-203ENST00000376809 HIST2H2ACQ16777 129 aaPredicted RBP17.11■□□□□ 0.33
HLA-A-203ENST00000376809 HIST2H2AA3Q6FI13 130 aa17.11■□□□□ 0.33
HLA-A-203ENST00000376809 CLYBLQ8N0X4 340 aa17.11■□□□□ 0.33
HLA-A-203ENST00000376809 KRT78Q8N1N4 520 aa17.11■□□□□ 0.33
HLA-A-203ENST00000376809 C19orf47Q8N9M1 422 aaKnown RBP17.11■□□□□ 0.33
HLA-A-203ENST00000376809 ZUFSPQ96AP4 578 aa17.11■□□□□ 0.33
HLA-A-203ENST00000376809 MAGEB10Q96LZ2 347 aaPredicted RBP17.11■□□□□ 0.33
HLA-A-203ENST00000376809 PRM3Q9NNZ6 103 aa17.11■□□□□ 0.33
HLA-A-203ENST00000376809 SOHLH2Q9NX45 425 aa17.11■□□□□ 0.33
HLA-A-203ENST00000376809 COL27A1Q8IZC6 1860 aaPredicted RBP17.11■□□□□ 0.33
HLA-A-203ENST00000376809 ADAMTS20P59510 1910 aa17.11■□□□□ 0.33
HLA-A-203ENST00000376809 D6RAR5 112 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 FGF4P08620 206 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 UROSP10746 265 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 CXCR2P25025 360 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 CYP4F3Q08477 520 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 KANK2Q63ZY3 851 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 ADNP2Q6IQ32 1131 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 MED27Q6P2C8 311 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 TMIGD1Q6UXZ0 262 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 ALYREFQ86V81 257 aaKnown RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 OR4D9Q8NGE8 314 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 PIWIL2Q8TC59 973 aaKnown RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 MTFMTQ96DP5 389 aaKnown RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 CHMP6Q96FZ7 201 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 FCRL4Q96PJ5 515 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 SLC29A3Q9BZD2 475 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 TOR4AQ9NXH8 423 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 ANKMY1Q9P2S6 941 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 ZNF490Q9ULM2 529 aaPredicted RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 KLK4Q9Y5K2 254 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 DMXL1Q9Y485 3027 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 HGSO14964 777 aaPredicted RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 OR1F1O43749 312 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 LCMT2O60294 686 aaKnown RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 CTSVO60911 334 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 SKAP2O75563 359 aaPredicted RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 PCNAP12004 261 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 CSRP1P21291 193 aaKnown RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 HTR6P50406 440 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 DDX39BQ13838 428 aaKnown RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 SGO1Q5FBB7 561 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 PRSS42Q7Z5A4 293 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 OR7G3Q8NG95 312 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 THOC1Q96FV9 657 aaKnown RBP17.1■□□□□ 0.33
HLA-A-203ENST00000376809 HBEGFQ99075 208 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 DPYSL5Q9BPU6 564 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 ELOVL6Q9H5J4 265 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 FAM60AQ9NP50 221 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 SNX6Q9UNH7 406 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 BTRCQ9Y297 605 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 PCDHGA11Q9Y5H2 935 aa17.1■□□□□ 0.33
HLA-A-203ENST00000376809 CEP250Q9BV73 2442 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 A0A0J9YVX5 310 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 IGHV5-10-1A0A0J9YXX1 117 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 TRBC2A0A5B9 178 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 H0YIV9 168 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 AGRPO00253 132 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 ZBTB11O95625 1053 aaPredicted RBP17.09■□□□□ 0.33
HLA-A-203ENST00000376809 SPTBP11277 2137 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 EZRP15311 586 aaKnown RBP17.09■□□□□ 0.33
HLA-A-203ENST00000376809 BCL6P41182 706 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 MLLT3P42568 568 aaPredicted RBP17.09■□□□□ 0.33
HLA-A-203ENST00000376809 NEK2P51955 445 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 IFT88Q13099 833 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 ILKQ13418 452 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 PDCD2Q16342 344 aaPredicted RBP17.09■□□□□ 0.33
HLA-A-203ENST00000376809 CLPPQ16740 277 aaPredicted RBP17.09■□□□□ 0.33
HLA-A-203ENST00000376809 PHF19Q5T6S3 580 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 FRG2Q64ET8 278 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 SCIMPQ6UWF3 145 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 GLRX5Q86SX6 157 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 CARFQ8N187 725 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 RNF175Q8N4F7 328 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 AFAP1L2Q8N4X5 818 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 RCBTB1Q8NDN9 531 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 TWIST2Q8WVJ9 160 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 UBE2E3Q969T4 207 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 CCDC74BQ96LY2 380 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 FRG2BQ96QU4 278 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 FAM107BQ9H098 131 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 FARSBQ9NSD9 589 aaKnown RBP17.09■□□□□ 0.33
HLA-A-203ENST00000376809 DNAJC15Q9Y5T4 150 aa17.09■□□□□ 0.33
HLA-A-203ENST00000376809 SPAARA0A1B0GVQ0 90 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 GMNCA6NCL1 334 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 MANBAO00462 879 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 CHEK2O96017 543 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 KRT6AP02538 564 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 KRT6BP04259 564 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 THRAP10827 490 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 KRT6CP48668 564 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 ARL4DP49703 201 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 CYP4F2P78329 520 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 SF3A3Q12874 501 aaKnown RBP eCLIP17.08■□□□□ 0.323e-13■■■□□ 18.9
HLA-A-203ENST00000376809 DEFB110Q30KQ9 67 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 UGT3A2Q3SY77 523 aa17.08■□□□□ 0.32
HLA-A-203ENST00000376809 TUBB8Q3ZCM7 444 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms