RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 RAD51AP1Q96B01 352 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 VAPAQ9P0L0 249 aa16.32■□□□□ 0.2
VARS-215ENST00000375663 VIPP01282 170 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 GBAP04062 536 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 AGXTP21549 392 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 CCR4P51679 360 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 SP3Q02447 781 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 UBXN11Q5T124 520 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 MBOAT1Q6ZNC8 495 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 DNAJB7Q7Z6W7 309 aaPredicted RBP16.31■□□□□ 0.2
VARS-215ENST00000375663 GALNT10Q86SR1 603 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 SPARTQ8N0X7 666 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 OR4K1Q8NGD4 311 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 KCTD7Q96MP8 289 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 MCUBQ9NWR8 336 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 SPATA7Q9P0W8 599 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 HCN4Q9Y3Q4 1203 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 PCDHGA8Q9Y5G5 932 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 ISPDA4D126 451 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 GLTPD2A6NH11 291 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 ARHGEF33A8MVX0 844 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 C1QTNF3-AMACRE9PGA6 284 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 LDB2O43679 373 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 PDYNP01213 254 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 RPL4P36578 427 aaKnown RBP16.31■□□□□ 0.2
VARS-215ENST00000375663 CAPZA2P47755 286 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 CD83Q01151 205 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 E2F2Q14209 437 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 C18orf21Q32NC0 220 aaPredicted RBP16.31■□□□□ 0.2
VARS-215ENST00000375663 CYP4V2Q6ZWL3 525 aaPredicted RBP16.31■□□□□ 0.2
VARS-215ENST00000375663 BEND5Q7L4P6 421 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 ALDH16A1Q8IZ83 802 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 SOX14O95416 240 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 CD247P20963 164 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 GKP32189 559 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 AGTRAPQ6RW13 159 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 PAQR9Q6ZVX9 377 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 ZBED6CLQ96FA7 236 aaPredicted RBP16.31■□□□□ 0.2
VARS-215ENST00000375663 ALPK1Q96QP1 1244 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 ARNT2Q9HBZ2 717 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 TAS2R7Q9NYW3 318 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 OARD1Q9Y530 152 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 SPO11Q9Y5K1 396 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 CROCCQ5TZA2 2017 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 PDPK1O15530 556 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 ZNF623O75123 536 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 ATP1B2P14415 290 aaPredicted RBP16.31■□□□□ 0.2
VARS-215ENST00000375663 CDKN1CP49918 316 aaPredicted RBP16.31■□□□□ 0.2
VARS-215ENST00000375663 PPP5CP53041 499 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 LRRC66Q68CR7 880 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 ZNF438Q7Z4V0 828 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 TRPV1Q8NER1 839 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 FAM110BQ8TC76 370 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 CEP295NLQ96MC4 621 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 TRNT1Q96Q11 434 aaKnown RBP16.31■□□□□ 0.2
VARS-215ENST00000375663 PHOX2BQ99453 314 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 PTPN18Q99952 460 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 C1QTNF1Q9BXJ1 281 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 TIGARQ9NQ88 270 aa16.31■□□□□ 0.2
VARS-215ENST00000375663 ZCCHC3Q9NUD5 404 aaKnown RBP16.31■□□□□ 0.2
VARS-215ENST00000375663 OR6C70A6NIJ9 312 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 H1F0P07305 194 aaKnown RBP16.3■□□□□ 0.2
VARS-215ENST00000375663 YES1P07947 543 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 TXNDC8Q6A555 127 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 MAMDC4Q6UXC1 1216 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 VTCN1Q7Z7D3 282 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 SCD5Q86SK9 330 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 OR8D1Q8WZ84 308 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 ISL2Q96A47 359 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 NARS2Q96I59 477 aaKnown RBP16.3■□□□□ 0.2
VARS-215ENST00000375663 CXCL16Q9H2A7 254 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 MAGIXQ9H6Y5 334 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 SYNDIG1Q9H7V2 258 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 RIMKLBQ9ULI2 386 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 MRPS23Q9Y3D9 190 aaKnown RBP16.3■□□□□ 0.2
VARS-215ENST00000375663 ECM29Q5VYK3 1845 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 PITPNM1O00562 1244 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 RPS17P08708 135 aaKnown RBP16.3■□□□□ 0.2
VARS-215ENST00000375663 CLDN8P56748 225 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 C10orf62Q5T681 223 aaPredicted RBP16.3■□□□□ 0.2
VARS-215ENST00000375663 CCBE1Q6UXH8 406 aaPredicted RBP16.3■□□□□ 0.2
VARS-215ENST00000375663 CHCHD4Q8N4Q1 142 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 DCAF4L2Q8NA75 395 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 MS4A12Q9NXJ0 267 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 SLAMF8Q9P0V8 285 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 PRKAB1Q9Y478 270 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 MYO10Q9HD67 2058 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 SCN7AQ01118 1682 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 UPK3BL1B0FP48 263 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 UPK3BL2E5RIL1 263 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 CDRT1O95170 752 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 KLK1P06870 262 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 ARPC4P59998 168 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 PLEKHG7Q6ZR37 379 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 CHMP1BQ7LBR1 199 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 GALNT12Q8IXK2 581 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 PIGXQ8TBF5 258 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 ATOH8Q96SQ7 321 aa16.3■□□□□ 0.2
VARS-215ENST00000375663 DPH2Q9BQC3 489 aaPredicted RBP16.3■□□□□ 0.2
VARS-215ENST00000375663 UCK2Q9BZX2 261 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms