RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 FAM25EA8MYX2 175 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 WNT9AO14904 365 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 AURKAO14965 403 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 CDRT1O95170 752 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 FGF19O95750 216 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 MT-ND2P03891 347 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 IL4RP24394 825 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 CMPK1P30085 196 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 KDELR2P33947 212 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 CAP1Q01518 475 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 TMEM236Q5W0B7 351 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 AMZ2Q86W34 360 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 MARCH9Q86YJ5 346 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-203ENST00000375274 OR52B6Q8NGF0 335 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 NPLOC4Q8TAT6 608 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 KBTBD7Q8WVZ9 684 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 P2RX2Q9UBL9 471 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 YIPF1Q9Y548 306 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 TRBV23OR9-2A0A075B6M9 112 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 A0A0J9YVX5 310 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 TLX2O43763 284 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-203ENST00000375274 DNTTP04053 509 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 C8AP07357 584 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 CAPN3P20807 821 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 WASP42768 502 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 PSMD8P48556 350 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF45Q02386 682 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 ST3GAL4Q11206 333 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 CBLBQ13191 982 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 NOGQ13253 232 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 VMACQ2NL98 169 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 TXNDC8Q6A555 127 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 GDPD4Q6W3E5 623 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 NXPE1Q8N323 547 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 NATD1Q8N6N6 113 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 SMG7Q92540 1137 aaKnown RBP11.21□□□□□ -0.62
PTCH1-203ENST00000375274 RANBP9Q96S59 729 aa11.21□□□□□ -0.62
PTCH1-203ENST00000375274 PAK1IP1Q9NWT1 392 aaPredicted RBP11.21□□□□□ -0.62
PTCH1-203ENST00000375274 SOX14O95416 240 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 SNAI1O95863 264 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 BCKDHAP12694 445 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 AVPR1BP47901 424 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 OLFML2AQ68BL7 652 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 TPGS2Q68CL5 300 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 SYCE2Q6PIF2 218 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 NCCRP1Q6ZVX7 275 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 GALNT13Q8IUC8 556 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 TMEM130Q8N3G9 435 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 KLHL36Q8N4N3 616 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 PHOX2BQ99453 314 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 IFT27Q9BW83 186 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 FUNDC2Q9BWH2 189 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 FAM118AQ9NWS6 357 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 TPD52L2O43399 206 aaKnown RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 PRAMEF12O95522 483 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 GSTM3P21266 225 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 CD68P34810 354 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 MAP2K4P45985 399 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 PRAMEF14Q5SWL7 426 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 PRAMEF13Q5VWM6 474 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 NOXRED1Q6NXP6 359 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ASB18Q6ZVZ8 466 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 IQCHQ86VS3 1027 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 TMC8Q8IU68 726 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 SAMD14Q8IZD0 417 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 DCAF4L2Q8NA75 395 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ZNF563Q8TA94 476 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 DEFB118Q96PH6 123 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ELL3Q9HB65 397 aaPredicted RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ARMC1Q9NVT9 282 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ERVK-18Q9QC07 812 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 A0A096LPI6 279 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 MCIDASD6RGH6 385 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 WWP2O00308 870 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 NFATC1O95644 943 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 GBAP04062 536 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 PCCBP05166 539 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ALPPP05187 535 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 CPN2P22792 545 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 NCBP2P52298 156 aaKnown RBP eCLIP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 SMSP52788 366 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 STXBP1P61764 594 aaKnown RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 RPP38P78345 283 aaKnown RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 PMS2P3Q13401 168 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 LRRC66Q68CR7 880 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 CHADLQ6NUI6 762 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ZFAND4Q86XD8 727 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 TICAM1Q8IUC6 712 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 KRTCAP2Q8N6L1 136 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 OR4K1Q8NGD4 311 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 TBX5Q99593 518 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 BARD1Q99728 777 aaKnown RBP11.2□□□□□ -0.62
PTCH1-203ENST00000375274 YIPF4Q9BSR8 244 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ZSCAN5AQ9BUG6 496 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 MND1Q9BWT6 205 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 OR51B5Q9H339 312 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 ADAP2Q9NPF8 381 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 NECTIN3Q9NQS3 549 aa11.2□□□□□ -0.62
PTCH1-203ENST00000375274 EMCNQ9ULC0 261 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms