RNA–Protein interactions for RNA: ENST00000375128.4

XPA-201, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPA, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-201ENST00000375128 SLC22A9Q8IVM8 553 aa20.83■□□□□ 0.93
XPA-201ENST00000375128 ZNF655Q8N720 491 aaPredicted RBP20.83■□□□□ 0.93
XPA-201ENST00000375128 ARMC2Q8NEN0 867 aa20.83■□□□□ 0.93
XPA-201ENST00000375128 TCP10LQ8TDR4 215 aa20.83■□□□□ 0.93
XPA-201ENST00000375128 OR2A5Q96R48 311 aa20.83■□□□□ 0.93
XPA-201ENST00000375128 SPNS1Q9H2V7 528 aa20.83■□□□□ 0.93
XPA-201ENST00000375128 TMBIM4Q9HC24 238 aa20.83■□□□□ 0.93
XPA-201ENST00000375128 G3V2L1 256 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 E2F3O00716 465 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 ZNF749O43361 778 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 LCMT2O60294 686 aaKnown RBP20.82■□□□□ 0.92
XPA-201ENST00000375128 STK17BO94768 372 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 CPA3P15088 417 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 EPORP19235 508 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 CXCR2P25025 360 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 CD82P27701 267 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 NFKB2Q00653 900 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 CHIT1Q13231 466 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 COL9A2Q14055 689 aaPredicted RBP20.82■□□□□ 0.92
XPA-201ENST00000375128 RBBP5Q15291 538 aaKnown RBP20.82■□□□□ 0.92
XPA-201ENST00000375128 METTL2BQ6P1Q9 378 aaKnown RBP20.82■□□□□ 0.92
XPA-201ENST00000375128 TLDC1Q6P9B6 456 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 GOLGA7Q7Z5G4 137 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 ZNF740Q8NDX6 193 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 RDH11Q8TC12 318 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 PPP4R1Q8TF05 950 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 FGF11Q92914 225 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 CLIP3Q96DZ5 547 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 FAM111AQ96PZ2 611 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 IPPKQ9H8X2 491 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 SYNPO2LQ9H987 977 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 WDR70Q9NW82 654 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 SLC17A7Q9P2U7 560 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 MID2Q9UJV3 735 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 SDK2Q58EX2 2172 aa20.82■□□□□ 0.92
XPA-201ENST00000375128 TRBC2A0A5B9 178 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 AGPSO00116 658 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 ZSCAN9O15535 394 aaPredicted RBP20.81■□□□□ 0.92
XPA-201ENST00000375128 KATNA1O75449 491 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 ARL1P40616 181 aaPredicted RBP20.81■□□□□ 0.92
XPA-201ENST00000375128 BCL6P41182 706 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 PIK3CGP48736 1102 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 HERVK_113P63132 956 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 REEP5Q00765 189 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 DOC2AQ14183 400 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 SLBPQ14493 270 aaKnown RBP eCLIP20.81■□□□□ 0.92
XPA-201ENST00000375128 TTC29Q8NA56 475 aaPredicted RBP20.81■□□□□ 0.92
XPA-201ENST00000375128 MFSD9Q8NBP5 474 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 ATP6V1E2Q96A05 226 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 CCDC126Q96EE4 140 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 THAP11Q96EK4 314 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 PTCD3Q96EY7 689 aaKnown RBP20.81■□□□□ 0.92
XPA-201ENST00000375128 ERVK-6Q9BXR3 956 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 NOL11Q9H8H0 719 aaKnown RBP20.81■□□□□ 0.92
XPA-201ENST00000375128 ACTR5Q9H9F9 607 aaPredicted RBP20.81■□□□□ 0.92
XPA-201ENST00000375128 GEMIN8Q9NWZ8 242 aaKnown RBP20.81■□□□□ 0.92
XPA-201ENST00000375128 DKK4Q9UBT3 224 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 PCTPQ9UKL6 214 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 PCDHB3Q9Y5E6 796 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 AP1M2Q9Y6Q5 423 aa20.81■□□□□ 0.92
XPA-201ENST00000375128 KCNE1BA0A087WTH5 132 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 H3BMH7 237 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 STMND1H3BQB6 276 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 TYROBPO43914 113 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 PRAMEF4O60810 478 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 CPNE3O75131 537 aaKnown RBP20.8■□□□□ 0.92
XPA-201ENST00000375128 SUPT7LO94864 414 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 STATHP02808 62 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 RPS17P08708 135 aaKnown RBP20.8■□□□□ 0.92
XPA-201ENST00000375128 IMPDH1P20839 514 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 PRKAA2P54646 552 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 PCBP4P57723 403 aaKnown RBP20.8■□□□□ 0.92
XPA-201ENST00000375128 GRM7Q14831 915 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 PRAMEF9Q5VWM5 478 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 RPS27LQ71UM5 84 aaKnown RBP20.8■□□□□ 0.92
XPA-201ENST00000375128 MYLK4Q86YV6 388 aaPredicted RBP20.8■□□□□ 0.92
XPA-201ENST00000375128 KRT78Q8N1N4 520 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 CSNK1A1LQ8N752 337 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 NSUN5Q96P11 429 aaKnown RBP20.8■□□□□ 0.92
XPA-201ENST00000375128 TMEM237Q96Q45 408 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 NDC1Q9BTX1 674 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 EHD1Q9H4M9 534 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 VIPAS39Q9H9C1 493 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 KCNK9Q9NPC2 374 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 SEMA4BQ9NPR2 832 aaPredicted RBP20.8■□□□□ 0.92
XPA-201ENST00000375128 ACSS2Q9NR19 701 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 COPG2Q9UBF2 871 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 PCDHGA4Q9Y5G9 962 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 ACTL7BQ9Y614 415 aa20.8■□□□□ 0.92
XPA-201ENST00000375128 TEX51A0A1B0GUA7 166 aa20.79■□□□□ 0.92
XPA-201ENST00000375128 TLX3O43711 291 aaPredicted RBP20.79■□□□□ 0.92
XPA-201ENST00000375128 CDH13P55290 713 aa20.79■□□□□ 0.92
XPA-201ENST00000375128 HIST2H2ACQ16777 129 aaPredicted RBP20.79■□□□□ 0.92
XPA-201ENST00000375128 HKDC1Q2TB90 917 aa20.79■□□□□ 0.92
XPA-201ENST00000375128 PAGE2BQ5JRK9 111 aa20.79■□□□□ 0.92
XPA-201ENST00000375128 ZNF678Q5SXM1 525 aa20.79■□□□□ 0.92
XPA-201ENST00000375128 HIST2H2AA3Q6FI13 130 aa20.79■□□□□ 0.92
XPA-201ENST00000375128 ASPGQ86U10 573 aa20.79■□□□□ 0.92
XPA-201ENST00000375128 GALNT6Q8NCL4 622 aa20.79■□□□□ 0.92
XPA-201ENST00000375128 MOCOSQ96EN8 888 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms