RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 ZNF548Q8NEK5 533 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TRPV3Q8NET8 790 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GATA6Q92908 595 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 COL25A1Q9BXS0 654 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 RPF2Q9H7B2 306 aaKnown RBP17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PLAGL1Q9UM63 463 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TDRKHQ9Y2W6 561 aaKnown RBP17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PCDHB14Q9Y5E9 798 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 NUP214P35658 2090 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 LRP4O75096 1905 aa17.34■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SCAMP2O15127 329 aaKnown RBP17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 TIPRLO75663 272 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 LRATO95237 230 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OXTRP30559 389 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KIAA1024LP59773 190 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PPP2CBP62714 309 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PPP2CAP67775 309 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CYP51A1Q16850 503 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PGS1Q32NB8 556 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 EOGTQ5NDL2 527 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GLYATQ6IB77 296 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CALHM3Q86XJ0 350 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KRT78Q8N1N4 520 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OR2T12Q8NG77 320 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 OR52E4Q8NGH9 312 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SMPDL3AQ92484 453 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 CXorf40BQ96DE9 158 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MSANTD3Q96H12 275 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 MRGPRX1Q96LB2 322 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 NSMCE2Q96MF7 247 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 REXO4Q9GZR2 422 aaKnown RBP17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 SPNS1Q9H2V7 528 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 IKZF5Q9H5V7 419 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KAT8Q9H7Z6 458 aaKnown RBP17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 GORASP2Q9H8Y8 452 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 KCNK12Q9HB15 430 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 WASH6PQ9NQA3 447 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 AGPAT4Q9NRZ5 378 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 ANAPC2Q9UJX6 822 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 RAB26Q9ULW5 256 aa17.33■□□□□ 0.37
HLA-DQB1-201ENST00000374943 PLXND1Q9Y4D7 1925 aa17.33■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FAM220BPB1ANY3 271 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SCN2BO60939 215 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ANXA4P09525 319 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CDH1P12830 882 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ZNF26P17031 533 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 POLE2P56282 527 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 WNT3P56703 355 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MAP7Q14244 749 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 DUOXA1Q1HG43 343 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GTDC1Q4AE62 458 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FBXO43Q4G163 708 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 OR4F3Q6IEY1 312 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 DNAJC14Q6Y2X3 702 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 C17orf64Q86WR6 236 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 TRIM69Q86WT6 500 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RAB42Q8N4Z0 105 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 EME1Q96AY2 570 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GBP5Q96PP8 586 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 INPP5KQ9BT40 448 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 THUMPD3Q9BV44 507 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SLC6A13Q9NSD5 602 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ADGRE2Q9UHX3 823 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 AURKCQ9UQB9 309 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 WDR37Q9Y2I8 494 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 TMEM265A0A087WTH1 108 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 AKAP10O43572 662 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 DENRO43583 198 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PCDH7O60245 1069 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ANXA6P08133 673 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 COX7A2P14406 83 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RPL10P27635 214 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 HPCAL1P37235 193 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MED21Q13503 144 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MLF2Q15773 248 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 TMIGD1Q6UXZ0 262 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ABHD11Q8NFV4 315 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 OR7A2PQ8NGA2 310 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 OR10A6Q8NH74 314 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PPWD1Q96BP3 646 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 BIRC7Q96CA5 298 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 C12orf66Q96MD2 445 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 INSM2Q96T92 566 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PITHD1Q9GZP4 211 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SEMA6AQ9H2E6 1030 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RHBGQ9H310 441 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 TTYH1Q9H313 450 aaPredicted RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 SUFUQ9UMX1 484 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CFAP20Q9Y6A4 193 aaKnown RBP17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 XIRP2A4UGR9 3374 aa17.32■□□□□ 0.36
HLA-DQB1-201ENST00000374943 A0A1W2PPV9 198 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MAGEA13PA6NCF6 341 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 RFXANKO14593 260 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 PIM1P11309 404 aaPredicted RBP17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 ACADMP11310 421 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 FASP25445 335 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 MAT2AP31153 395 aaKnown RBP17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 CDKN2CP42773 168 aa17.31■□□□□ 0.36
HLA-DQB1-201ENST00000374943 GZMMP51124 257 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms