RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 ZFP37Q9Y6Q3 630 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 DSCR3O14972 297 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 NDUFB5O43674 189 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 SSX4O60224 188 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 GLUD1P00367 558 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 URODP06132 367 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 LINC00271P0C7V0 271 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 HOXB6P17509 224 aaKnown RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 CTPS1P17812 591 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 GRK5P34947 590 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 DEFA1P59665 94 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 DEFA3P59666 94 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 ELP6Q0PNE2 266 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 LINGO4Q6UY18 593 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 GDPD3Q7L5L3 318 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 TRIM46Q7Z4K8 759 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 CDC26Q8NHZ8 85 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 SELENOMQ8WWX9 145 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 FCGR1BQ92637 280 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 PDLIM5Q96HC4 596 aaKnown RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 EGLN2Q96KS0 407 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 CEP44Q9C0F1 390 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 MAGEH1Q9H213 219 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 P2RY12Q9H244 342 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 TLR8Q9NR97 1041 aaKnown RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 QPCTLQ9NXS2 382 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 UGT2A1Q9Y4X1 527 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 SLC25A14O95258 325 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 KRT6AP02538 564 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 KRT6BP04259 564 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 RPLP0P05388 317 aaKnown RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 SLC6A4P31645 630 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 UGT2B10P36537 528 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 KRT6CP48668 564 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 IDH2P48735 452 aaKnown RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 TUFMP49411 452 aaKnown RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF45Q02386 682 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.75□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF621Q6ZSS3 439 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 GATAD2AQ86YP4 633 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 CARNMT1Q8N4J0 409 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 CLSTN3Q9BQT9 956 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 NUAK2Q9H093 628 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 RPS6KA6Q9UK32 745 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 PPT2Q9UMR5 302 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 OARD1Q9Y530 152 aa10.75□□□□□ -0.69
CCDC40-203ENST00000374877 PDZK1P1A8MUH7 402 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 HAT1O14929 419 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 TLL1O43897 1013 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 ABLIM3O94929 683 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PDYNP01213 254 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 ENGP17813 658 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 KDELR2P33947 212 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 CLDN8P56748 225 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 CACNG1Q06432 222 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 RAB33AQ14088 237 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 SPANXN2Q5MJ10 180 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 GALNT13Q8IUC8 556 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 KBTBD8Q8NFY9 601 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 DNAJB8Q8NHS0 232 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PANX1Q96RD7 426 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 SEPT5Q99719 369 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 EMILIN2Q9BXX0 1053 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 ROGDIQ9GZN7 287 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 OLA1Q9NTK5 396 aaKnown RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 C14orf119Q9NWQ9 140 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 CXXC1Q9P0U4 656 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 SNX6Q9UNH7 406 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 RWDD3Q9Y3V2 267 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PCDHB9Q9Y5E1 797 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PCDHGB6Q9Y5F9 930 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 SNX8Q9Y5X2 465 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PTPRSQ13332 1948 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 CLIC1O00299 241 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 MRPS14O60783 128 aaKnown RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PRAMEF12O95522 483 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 EBLN1P0CF75 366 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 BMP1P13497 986 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF7P17097 686 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 CR2P20023 1033 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PTPN6P29350 595 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 AQP1P29972 269 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 SLC19A1P41440 591 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 MRPS15P82914 257 aaKnown RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 VMACQ2NL98 169 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 INO80DQ53TQ3 878 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 VASH1Q7L8A9 365 aaPredicted RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 SERPINA9Q86WD7 417 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 NLGN4XQ8N0W4 816 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 POP5Q969H6 163 aaKnown RBP10.74□□□□□ -0.69
CCDC40-203ENST00000374877 APOLD1Q96LR9 279 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 CENPOQ9BU64 300 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 EHD3Q9NZN3 535 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 ZNF221Q9UK13 617 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 MAN2B2Q9Y2E5 1009 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PCDHB1Q9Y5F3 818 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 PCDHGA6Q9Y5G7 932 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 ANKRD34BA5PLL1 514 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 WDR47O94967 919 aa10.74□□□□□ -0.69
CCDC40-203ENST00000374877 CPSF4O95639 269 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 532.6 ms