RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 CEP290O15078 2479 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 FADS2O95864 444 aaKnown RBP16.48■□□□□ 0.23
RXRB-201ENST00000374680 ADH1AP07327 375 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 RETP07949 1114 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 POU2F1P14859 743 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 PRPS1L1P21108 318 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 NRIP1P48552 1158 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 RAD23AP54725 363 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 AQP6Q13520 282 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 SLC44A2Q8IWA5 706 aaPredicted RBP16.48■□□□□ 0.23
RXRB-201ENST00000374680 NRBF2Q96F24 287 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 PLGRKTQ9HBL7 147 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 SPASTQ9UBP0 616 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 ZNF510Q9Y2H8 683 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 GMPPBQ9Y5P6 360 aa16.48■□□□□ 0.23
RXRB-201ENST00000374680 IGLV3-16A0A075B6K0 115 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 TRIM43BA6NCK2 446 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 M0R129 80 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 WNT9AO14904 365 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 PCDH7O60245 1069 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 VIPP01282 170 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 HNRNPCP07910 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
RXRB-201ENST00000374680 SYN1P17600 705 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 FUT4P22083 530 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 PSMB9P28065 219 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 MAPK1P28482 360 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 VIPR1P32241 457 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 HNMTP50135 292 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 C21orf59P57076 290 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 SKIV2LQ15477 1246 aaKnown RBP16.47■□□□□ 0.23
RXRB-201ENST00000374680 CPTPQ5TA50 214 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 BTLAQ7Z6A9 289 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 PTOV1Q86YD1 416 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 SLC15A4Q8N697 577 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 OR7G3Q8NG95 312 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 CIDECQ96AQ7 238 aaPredicted RBP16.47■□□□□ 0.23
RXRB-201ENST00000374680 TRIM43Q96BQ3 446 aaPredicted RBP16.47■□□□□ 0.23
RXRB-201ENST00000374680 ZNF641Q96N77 438 aaPredicted RBP16.47■□□□□ 0.23
RXRB-201ENST00000374680 CLK3P49761 638 aaKnown RBP16.47■□□□□ 0.23
RXRB-201ENST00000374680 ARHGDIAP52565 204 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 ITGADQ13349 1161 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 GAB1Q13480 694 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 COX20Q5RI15 118 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 LILRA6Q6PI73 481 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 ZZZ3Q8IYH5 903 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 CHPFQ8IZ52 775 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 SVOPLQ8N434 492 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 CLP1Q92989 425 aaKnown RBP16.47■□□□□ 0.23
RXRB-201ENST00000374680 KCNC2Q96PR1 638 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 CPEB1Q9BZB8 566 aaKnown RBP16.47■□□□□ 0.23
RXRB-201ENST00000374680 TRIM39Q9HCM9 518 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 OGDHLQ9ULD0 1010 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 COL4A6Q14031 1691 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 GON4LQ3T8J9 2241 aa16.47■□□□□ 0.23
RXRB-201ENST00000374680 CCNDBP1O95273 360 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 FABP3P05413 133 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 IMPA1P29218 277 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 VIPR2P41587 438 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 MNX1P50219 401 aaPredicted RBP16.46■□□□□ 0.23
RXRB-201ENST00000374680 EMX1Q04741 257 aaPredicted RBP16.46■□□□□ 0.23
RXRB-201ENST00000374680 PLEKHS1Q5SXH7 462 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 TTC29Q8NA56 475 aaPredicted RBP16.46■□□□□ 0.23
RXRB-201ENST00000374680 HDAC2Q92769 488 aaKnown RBP16.46■□□□□ 0.23
RXRB-201ENST00000374680 LRRC3BQ96PB8 259 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 TMEM45AQ9NWC5 275 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 CXXC1Q9P0U4 656 aaPredicted RBP16.46■□□□□ 0.23
RXRB-201ENST00000374680 SCN2BO60939 215 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 CLTBP09497 229 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 ETFAP13804 333 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 EPCAMP16422 314 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 PHEXP78562 749 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 NPTX1Q15818 432 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 LRRC26Q2I0M4 334 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 CCDC149Q6ZUS6 474 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 LSRQ86X29 649 aaPredicted RBP16.46■□□□□ 0.23
RXRB-201ENST00000374680 SMYD1Q8NB12 490 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 ZNF540Q8NDQ6 660 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 PIK3C3Q8NEB9 887 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 MAP4K5Q9Y4K4 846 aa16.46■□□□□ 0.23
RXRB-201ENST00000374680 NOTCH4Q99466 2003 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 ABHD14A-ACY1A0A1B0GW23 586 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 BCAS1O75363 584 aaPredicted RBP16.46■□□□□ 0.22
RXRB-201ENST00000374680 MYO1DO94832 1006 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 CCR3P51677 355 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 CYP4F2P78329 520 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 ZNF385BQ569K4 471 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 C12orf40Q86WS4 652 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 HIPK1Q86Z02 1210 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 PLPP6Q8IY26 295 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 C12orf76Q8N812 135 aaPredicted RBP16.46■□□□□ 0.22
RXRB-201ENST00000374680 OR4A15Q8NGL6 344 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 RNF217Q8TC41 542 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 CSGALNACT1Q8TDX6 532 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 BTN2A2Q8WVV5 523 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 TESCQ96BS2 214 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 SPNS1Q9H2V7 528 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.46■□□□□ 0.22
RXRB-201ENST00000374680 TMEM184CQ9NVA4 438 aa16.46■□□□□ 0.22
RXRB-201ENST00000374680 SAMD4AQ9UPU9 718 aaKnown RBP16.46■□□□□ 0.22
RXRB-201ENST00000374680 MAN2B2Q9Y2E5 1009 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms