RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 FZD3Q9NPG1 666 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 FBXL12Q9NXK8 326 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 PTTG2Q9NZH5 202 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 KLHL20Q9Y2M5 609 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 LYVE1Q9Y5Y7 322 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 A0A1B0GTW7 788 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 IGLON5A6NGN9 336 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 ZW10O43264 779 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 DLGAP3O95886 979 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 PTGER1P34995 402 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 ARL4DP49703 201 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 RFX4Q33E94 735 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 UGT2A3Q6UWM9 527 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 OR5K1Q8NHB7 308 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 NFKBIDQ8NI38 313 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 NETO1Q8TDF5 533 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 TPK1Q9H3S4 243 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 RETREG1Q9H6L5 497 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 CARS2Q9HA77 564 aaKnown RBP13.12□□□□□ -0.31
CLIC4-201ENST00000374379 HCFC2Q9Y5Z7 792 aa13.12□□□□□ -0.31
CLIC4-201ENST00000374379 CENPFP49454 3210 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 VNN2O95498 520 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 C1SP09871 688 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 BMP1P13497 986 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 CTSEP14091 401 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 PPIBP23284 216 aaKnown RBP13.11□□□□□ -0.31
CLIC4-201ENST00000374379 ALDH3A2P51648 485 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 PON2Q15165 354 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 HACD2Q6Y1H2 254 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 RNF111Q6ZNA4 994 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 C16orf62Q7Z3J2 963 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 CNIH3Q8TBE1 160 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 DOK4Q8TEW6 326 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 TSPEARQ8WU66 669 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 EFCAB11Q9BUY7 163 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 FAIM2Q9BWQ8 316 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 SLC12A9Q9BXP2 914 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 SLC7A5P2Q9GIP4 190 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 CDC14AQ9UNH5 594 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 CORO2BQ9UQ03 480 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 FEZF1A0PJY2 475 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 MITFO75030 526 aaPredicted RBP13.11□□□□□ -0.31
CLIC4-201ENST00000374379 SDC1P18827 310 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 ANXA11P50995 505 aaKnown RBP13.11□□□□□ -0.31
CLIC4-201ENST00000374379 CCSMST1Q4G0I0 132 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 DEPDC1Q5TB30 811 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 DUS1LQ6P1R4 473 aaKnown RBP13.11□□□□□ -0.31
CLIC4-201ENST00000374379 NPAS3Q8IXF0 933 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 OR9A1PQ8NGU1 263 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 WFIKKN2Q8TEU8 576 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 FRS2Q8WU20 508 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 SLC9A6Q92581 669 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 VN1R3Q9BXE9 311 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 ZCCHC3Q9NUD5 404 aaKnown RBP13.11□□□□□ -0.31
CLIC4-201ENST00000374379 KLHL28Q9NXS3 571 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 IL37Q9NZH6 218 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 PCDHB3Q9Y5E6 796 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 SLC7A9P82251 487 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 NR1D2Q14995 579 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 GALNT18Q6P9A2 607 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 LRRTM4Q86VH4 590 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 FAM20CQ8IXL6 584 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 TRAM1L1Q8N609 369 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 SLC5A11Q8WWX8 675 aa13.11□□□□□ -0.31
CLIC4-201ENST00000374379 PTBP2Q9UKA9 531 aaKnown RBP13.11□□□□□ -0.31
CLIC4-201ENST00000374379 EDDM13A0A1B0GTR0 161 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 TMEM202A6NGA9 273 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 H3BNC9 293 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 DENRO43583 198 aaKnown RBP13.1□□□□□ -0.31
CLIC4-201ENST00000374379 KELP23276 732 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 RPL3P39023 403 aaKnown RBP13.1□□□□□ -0.31
CLIC4-201ENST00000374379 LBX1P52954 281 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 TGM3Q08188 693 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 SCARB2Q14108 478 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 PTCHD4Q6ZW05 846 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 PARS2Q7L3T8 475 aaKnown RBP13.1□□□□□ -0.31
CLIC4-201ENST00000374379 GALNT7Q86SF2 657 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 RNF130Q86XS8 419 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 LCN9Q8WX39 176 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 SORBS1Q9BX66 1292 aaKnown RBP13.1□□□□□ -0.31
CLIC4-201ENST00000374379 C11orf16Q9NQ32 467 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 STOX2Q9P2F5 926 aaPredicted RBP13.1□□□□□ -0.31
CLIC4-201ENST00000374379 PCDHGB5Q9Y5G0 923 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 LOC100130705A0A1B0GUX0 176 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 JUPP14923 745 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 CCR2P41597 374 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 ACTR1BP42025 376 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 CDC42P60953 191 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 ACTR1AP61163 376 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 ACVR1Q04771 509 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 ATP6AP1Q15904 470 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 DPY19L1Q2PZI1 675 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 ZHX1-C8orf76Q96EF9 292 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 CEP295NLQ96MC4 621 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 IL4I1Q96RQ9 567 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 MIR1-1HGQ9H1L0 117 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 TMEM245Q9H330 911 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 CD320Q9NPF0 282 aa13.1□□□□□ -0.31
CLIC4-201ENST00000374379 ITM2CQ9NQX7 267 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms