RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 UPK3BL1B0FP48 263 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 ANKRD66B4E2M5 251 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 UPK3BL2E5RIL1 263 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 ZNF670-ZNF695F2Z2N8 137 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 ITGB1P05556 798 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 HSD11B1P28845 292 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 CDCA2Q69YH5 1023 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-203ENST00000373672 HFE2Q6ZVN8 426 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 NXPE2Q96DL1 559 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 Q9Y3F1 56 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 CLDN7O95471 211 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 TSTQ16762 297 aaKnown RBP17.54■□□□□ 0.4
COL16A1-203ENST00000373672 RBM20Q5T481 1227 aaKnown RBP17.54■□□□□ 0.4
COL16A1-203ENST00000373672 CCSAPQ6IQ19 270 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-203ENST00000373672 SLC29A4Q7RTT9 530 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 NDC1Q9BTX1 674 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 FBXO9Q9UK97 447 aaPredicted RBP17.54■□□□□ 0.4
COL16A1-203ENST00000373672 MYOM1P52179 1685 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 GNSP15586 552 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 CLCNKAP51800 687 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 ST3GAL3Q11203 375 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 SEMA3AQ14563 771 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 ERMP1Q7Z2K6 904 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 OR52E4Q8NGH9 312 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 CYB5D2Q8WUJ1 264 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 SCLYQ96I15 445 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 HSH2DQ96JZ2 352 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 PKP2Q99959 881 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 SLC6A15Q9H2J7 730 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 TMEM59LQ9UK28 342 aa17.54■□□□□ 0.4
COL16A1-203ENST00000373672 A0A1W2PP18 115 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 B4DGG1 531 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 KAT7O95251 611 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 NPPAP01160 153 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 TUBA1BP68363 451 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 TUBA4AP68366 448 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 ZNF630Q2M218 657 aaPredicted RBP17.53■□□□□ 0.4
COL16A1-203ENST00000373672 AMZ1Q400G9 498 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 KLHL26Q53HC5 615 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 TPRG1LQ5T0D9 272 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 TUBA1AQ71U36 451 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 A0A0J9YVX5 310 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 CAPN14A8MX76 684 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 FSHRP23945 695 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 GHRHRQ02643 423 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 TUBA3CQ13748 450 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 ARFRP1Q13795 201 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 YIPF7Q8N8F6 280 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 MCCC2Q9HCC0 563 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 CCDC85CA6NKD9 419 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 SCDO00767 359 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 KCNE1P15382 129 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 RPL19P84098 196 aaKnown RBP17.53■□□□□ 0.4
COL16A1-203ENST00000373672 ASB18Q6ZVZ8 466 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 CELF5Q8N6W0 485 aaKnown RBP17.53■□□□□ 0.4
COL16A1-203ENST00000373672 TSTD1Q8NFU3 115 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 PPEF2O14830 753 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 CREG1O75629 220 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 OAS1P00973 400 aaKnown RBP17.53■□□□□ 0.4
COL16A1-203ENST00000373672 ATP4BP51164 291 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 OR12D2P58182 307 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.53■□□□□ 0.4
COL16A1-203ENST00000373672 TUBA3EQ6PEY2 450 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 AQP11Q8NBQ7 271 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 KIAA1191Q96A73 305 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 SHPRHQ149N8 1683 aa17.53■□□□□ 0.4
COL16A1-203ENST00000373672 ACRP10323 421 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 STC1P52823 247 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 ABHD18Q0P651 414 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 ZMYND11Q15326 602 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 CEACAM20Q6UY09 585 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 TPRG1Q6ZUI0 275 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 INO80EQ8NBZ0 244 aaPredicted RBP17.52■□□□□ 0.4
COL16A1-203ENST00000373672 LRRC20Q8TCA0 184 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 BIRC7Q96CA5 298 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 TMEM248Q9NWD8 314 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 FESP07332 822 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 CASRP41180 1078 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 ARL9Q6T311 187 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 TMCO2Q7Z6W1 182 aaPredicted RBP17.52■□□□□ 0.4
COL16A1-203ENST00000373672 CILP2Q8IUL8 1156 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 AVL9Q8NBF6 648 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 SLC5A11Q8WWX8 675 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 LRRC42Q9Y546 428 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 MAU2Q9Y6X3 613 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 LCHNA4D1U4 455 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 ARL6IP5O75915 188 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 RAB36O95755 333 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 G6PDP11413 515 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 MLLT6P55198 1093 aaPredicted RBP17.52■□□□□ 0.4
COL16A1-203ENST00000373672 EMX2Q04743 252 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 ADAM15Q13444 863 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 Q6ZVU0 165 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 CEP97Q8IW35 865 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 TMED9Q9BVK6 235 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 TRPV4Q9HBA0 871 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 ZNF69Q9UC07 566 aa17.52■□□□□ 0.4
COL16A1-203ENST00000373672 ARVCFO00192 962 aa17.52■□□□□ 0.39
COL16A1-203ENST00000373672 CA12O43570 354 aa17.52■□□□□ 0.39
COL16A1-203ENST00000373672 PCDHGA12O60330 932 aa17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms