RNA–Protein interactions for RNA: ENST00000373560.6

HDAC8-204, Transcript of histone deacetylase 8, humanhuman

TSL 3 BASIC

Gene HDAC8, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-204ENST00000373560 ZDHHC20Q5W0Z9 365 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 RNF44Q7L0R7 432 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 PAQR7Q86WK9 346 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 ARHGEF39Q8N4T4 335 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 CLDN19Q8N6F1 224 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 ZFP62Q8NB50 900 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-204ENST00000373560 POGLUT1Q8NBL1 392 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 DCUN1D1Q96GG9 259 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 UCN2Q96RP3 112 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 CYTH2Q99418 400 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 MMP25Q9NPA2 562 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 MKKSQ9NPJ1 570 aaPredicted RBP11.46□□□□□ -0.57
HDAC8-204ENST00000373560 DEPPQ9NTK1 212 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.46□□□□□ -0.57
HDAC8-204ENST00000373560 MYO1AQ9UBC5 1043 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 RUVBL1Q9Y265 456 aaKnown RBP11.46□□□□□ -0.57
HDAC8-204ENST00000373560 NPFFR2Q9Y5X5 522 aa11.46□□□□□ -0.57
HDAC8-204ENST00000373560 EML6Q6ZMW3 1958 aa11.46□□□□□ -0.58
HDAC8-204ENST00000373560 NCKAP5O14513 1909 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 LOC285095A0A1B0GVY8 99 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 TUBAL3A6NHL2 446 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 AGAP14A8MT82 685 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 DNAJB6O75190 326 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 STATHP02808 62 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 BMP5P22003 454 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 CD68P34810 354 aaPredicted RBP11.45□□□□□ -0.58
HDAC8-204ENST00000373560 ASCL1P50553 236 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 WNT3AP56704 352 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 RPA4Q13156 261 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 C1orf185Q5T7R7 199 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 HEPHL1Q6MZM0 1159 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 PAPD4Q6PIY7 484 aaKnown RBP11.45□□□□□ -0.58
HDAC8-204ENST00000373560 POMZP3Q6PJE2 187 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 MDGA2Q7Z553 956 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 ELOA2Q8IYF1 753 aaPredicted RBP11.45□□□□□ -0.58
HDAC8-204ENST00000373560 HORMAD2Q8N7B1 307 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 OR4K2Q8NGD2 314 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 OR13C4Q8NGS5 318 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 RNF217Q8TC41 542 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 M1APQ8TC57 530 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 SMC6Q96SB8 1091 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 PIP5K1AQ99755 562 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 MIPEPQ99797 713 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 TRABDQ9H4I3 376 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 GLOD4Q9HC38 313 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 CRLS1Q9UJA2 301 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 PKP3Q9Y446 797 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 PRSS21Q9Y6M0 314 aa11.45□□□□□ -0.58
HDAC8-204ENST00000373560 ABCA1O95477 2261 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 H0YGG7 62 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 NDC80O14777 642 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 STX7O15400 261 aaKnown RBP11.44□□□□□ -0.58
HDAC8-204ENST00000373560 AP2A1O95782 977 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 HSP90AA1P07900 732 aaKnown RBP11.44□□□□□ -0.58
HDAC8-204ENST00000373560 ARF3P61204 181 aaPredicted RBP11.44□□□□□ -0.58
HDAC8-204ENST00000373560 SLC14A2Q15849 920 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 MINDY4Q4G0A6 757 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 RIPPLY2Q5TAB7 128 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 NPNTQ6UXI9 565 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 PRSS41Q7RTY9 318 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 SLC13A5Q86YT5 568 aaPredicted RBP11.44□□□□□ -0.58
HDAC8-204ENST00000373560 SLC5A8Q8N695 610 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 SRPK1Q96SB4 655 aaKnown RBP11.44□□□□□ -0.58
HDAC8-204ENST00000373560 YIPF4Q9BSR8 244 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 TRIM45Q9H8W5 580 aaPredicted RBP11.44□□□□□ -0.58
HDAC8-204ENST00000373560 LUC7LQ9NQ29 371 aaKnown RBP11.44□□□□□ -0.58
HDAC8-204ENST00000373560 POLG2Q9UHN1 485 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 KLF13Q9Y2Y9 288 aaPredicted RBP11.44□□□□□ -0.58
HDAC8-204ENST00000373560 FAM169AQ9Y6X4 670 aa11.44□□□□□ -0.58
HDAC8-204ENST00000373560 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.43□□□□□ -0.58
HDAC8-204ENST00000373560 USF3Q68DE3 2245 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 IGLV3-16A0A075B6K0 115 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 P2RX6O15547 441 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 SRPX2O60687 465 aaPredicted RBP11.43□□□□□ -0.58
HDAC8-204ENST00000373560 CELA3AP09093 270 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 PEX19P40855 299 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 CYB561P49447 251 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 AP1B1Q10567 949 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 TNK1Q13470 666 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 SF1Q15637 639 aaKnown RBP11.43□□□□□ -0.58
HDAC8-204ENST00000373560 TPD52L1Q16890 204 aaPredicted RBP11.43□□□□□ -0.58
HDAC8-204ENST00000373560 FBXL19-AS1Q494R0 122 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 SFT2D3Q587I9 215 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 CATSPEREQ5SY80 951 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 MFSD4BQ5TF39 518 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 CCDC70Q6NSX1 233 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 RPS19BP1Q86WX3 136 aaKnown RBP11.43□□□□□ -0.58
HDAC8-204ENST00000373560 METTL21AQ8WXB1 218 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 FAF2Q96CS3 445 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 OXNAD1Q96HP4 312 aaPredicted RBP11.43□□□□□ -0.58
HDAC8-204ENST00000373560 COPS8Q99627 209 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 FICDQ9BVA6 458 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 ZDHHC11Q9H8X9 412 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 DSCAMO60469 2012 aa11.43□□□□□ -0.58
HDAC8-204ENST00000373560 SCN3AQ9NY46 2000 aa11.42□□□□□ -0.58
HDAC8-204ENST00000373560 ERVK-10P10266 1014 aa11.42□□□□□ -0.58
HDAC8-204ENST00000373560 NFKB1P19838 968 aa11.42□□□□□ -0.58
HDAC8-204ENST00000373560 ENDOUP21128 410 aaKnown RBP11.42□□□□□ -0.58
HDAC8-204ENST00000373560 CD9P21926 228 aa11.42□□□□□ -0.58
HDAC8-204ENST00000373560 PTH2RP49190 550 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms