RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 SETDB1Q15047 1291 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 FBXO48Q5FWF7 155 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 TCTE1Q5JU00 501 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 CEP85LQ5SZL2 805 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 PWWP2BQ6NUJ5 590 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 TLDC1Q6P9B6 456 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 C6orf15Q6UXA7 325 aaPredicted RBP17.56■□□□□ 0.4
PBX3-205ENST00000373492 LRIG3Q6UXM1 1119 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 TIPARPQ7Z3E1 657 aaKnown RBP17.56■□□□□ 0.4
PBX3-205ENST00000373492 VASH2Q86V25 355 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 SNX31Q8N9S9 440 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 ABHD11Q8NFV4 315 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 NEIL2Q969S2 332 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 RERGQ96A58 199 aaPredicted RBP17.56■□□□□ 0.4
PBX3-205ENST00000373492 ESAMQ96AP7 390 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 RUFY1Q96T51 708 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 EFHD1Q9BUP0 239 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 PELI2Q9HAT8 420 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 TMEM216Q9P0N5 145 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 GRID1Q9ULK0 1009 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 PCDHB3Q9Y5E6 796 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 TNPO3Q9Y5L0 923 aaKnown RBP17.56■□□□□ 0.4
PBX3-205ENST00000373492 AP1M2Q9Y6Q5 423 aa17.56■□□□□ 0.4
PBX3-205ENST00000373492 RGS16O15492 202 aaPredicted RBP17.55■□□□□ 0.4
PBX3-205ENST00000373492 HCRTR1O43613 425 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 KLK8O60259 260 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 CPNE3O75131 537 aaKnown RBP17.55■□□□□ 0.4
PBX3-205ENST00000373492 HBQ1P09105 142 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 VSX2P58304 361 aaPredicted RBP17.55■□□□□ 0.4
PBX3-205ENST00000373492 RPS15AP62244 130 aaKnown RBP17.55■□□□□ 0.4
PBX3-205ENST00000373492 CSNK1G2P78368 415 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 PDK4Q16654 411 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 FBXO42Q6P3S6 717 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 TMPRSS11BQ86T26 416 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 TRABD2AQ86V40 505 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 SRRM1Q8IYB3 904 aaKnown RBP17.55■□□□□ 0.4
PBX3-205ENST00000373492 C4orf33Q8N1A6 199 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 ZSCAN1Q8NBB4 408 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 CLIP3Q96DZ5 547 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 IQCGQ9H095 443 aaKnown RBP17.55■□□□□ 0.4
PBX3-205ENST00000373492 ANGPTL3Q9Y5C1 460 aa17.55■□□□□ 0.4
PBX3-205ENST00000373492 SCN2AQ99250 2005 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 K7EPI3 171 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 ZSCAN9O15535 394 aaPredicted RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 NRP2O60462 931 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 H2AFYO75367 372 aaKnown RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 TIAF1O95411 115 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 CCNYL3P0C7X3 344 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 CXCR2P25025 360 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 CRHR1P34998 444 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 AGTR2P50052 363 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 SRSF6Q13247 344 aaKnown RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 PCBP2Q15366 365 aaKnown RBP eCLIP17.54■□□□□ 0.4
PBX3-205ENST00000373492 CCDC153Q494R4 210 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 CATSPEREQ5SY80 951 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 METTL2BQ6P1Q9 378 aaKnown RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 C16orf46Q6P387 395 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 SH2D5Q6ZV89 423 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 ZNF655Q8N720 491 aaPredicted RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 PTGR2Q8N8N7 351 aaPredicted RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 TTC29Q8NA56 475 aaPredicted RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 GALNT6Q8NCL4 622 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 OR4K1Q8NGD4 311 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 KIAA1143Q96AT1 154 aaPredicted RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 PHF21BQ96EK2 531 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 THAP11Q96EK4 314 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 SMC6Q96SB8 1091 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 AIF1LQ9BQI0 150 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 SPRTNQ9H040 489 aaPredicted RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 CENPHQ9H3R5 247 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 ACTR5Q9H9F9 607 aaPredicted RBP17.54■□□□□ 0.4
PBX3-205ENST00000373492 SENP1Q9P0U3 644 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 SRPK3Q9UPE1 567 aa17.54■□□□□ 0.4
PBX3-205ENST00000373492 FEZF1A0PJY2 475 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 STX16-NPEPL1H3BU86 382 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 TXNDC9O14530 226 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 STX16O14662 325 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 ZNF749O43361 778 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 NTRK1P04629 796 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 EIF2S1P05198 315 aaKnown RBP17.53■□□□□ 0.4
PBX3-205ENST00000373492 MYZAPP0CAP1 466 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 C1GALT1C1LP0DN25 315 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 LIFP15018 202 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 EPB42P16452 691 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 STAT5AP42229 794 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 PIK3CGP48736 1102 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 ARSFP54793 590 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 RHDQ02161 417 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 SLC18A2Q05940 514 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 GRM7Q14831 915 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 WASHC2DQ5SRD0 308 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 FRMPD2BQ6IN97 320 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 NXPE4Q6UWF7 544 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 APOPT1Q96IL0 206 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 OR2A5Q96R48 311 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 UBL7Q96S82 380 aaPredicted RBP17.53■□□□□ 0.4
PBX3-205ENST00000373492 NDC1Q9BTX1 674 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 NLNQ9BYT8 704 aa17.53■□□□□ 0.4
PBX3-205ENST00000373492 GPN2Q9H9Y4 310 aaPredicted RBP17.53■□□□□ 0.4
PBX3-205ENST00000373492 TXLNGQ9NUQ3 528 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms